Detail



ID : Ahg318095

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|318095|fgenesh1_pm.C_scaffold_3001111
Sequence
ATGGAGATCA GAAGATCAAC AGAAGAAGTT GAAGAAAATC ATGTAATGCA GATTACAGGA AGCAATGGCA TAGTTCACAA CATGGAGTTC ATGCCCCAAG CTTACCTCAG AAACCAATAC TCATCCGAGA TTGACATCGA TGAAGAGTTT GTTTCCTCTT ATCCTCTCGA AGATGCCCCA CTTCCCATCT TTCTCAAGTT TGAAGATGTG GAGTATAAGG TGAGAAACAG TCAAGCTAGC TCGGCAAACC TGGTGAAAAC CATGGTGTCA AAGGTGGTAA CACATACGAA TCCGGATCCA GATGGGTACA AACACATTTT GAAAGGCATA ACAGGAAGCA CAGGTCCCGG CGAAATCCTT GCGCTGATGG GTCCTTCGGG TAGTGGCAAA ACAACTCTCT TGAAGATAAT GGGAGGAAGA TTGACAGATA ATGTCAAGGG GAAGCTTACC TATAATGACA TTCCTTACAG TCCATCTGTT AAGAGGAGAA TTGGTTTTGT GACGCAAGAC GATGTTCTGT TGCCACAACT TACTGTGGAA GAGACCTTGG CATTTGCTGC GTTTTTGAGA CTTCCAAGTA GCATGAGCAA GGAACAGAAA TACGCCAAAA TAGAGATGAT CATTAAAGAG CTTGGCCTTG AAAGATGCCG TCGGACAAGA GTTGGAGGAG GTTTTGTCAA GGGAATATCA GGTGGAGAAA GAAAAAGAGC AAGTATAGCT TACGAGATTC TCGTAGATCC TTCTCTGTTG CTTCTAGACG AGCCAACTTC TGGACTTGAC TCCACTTCTG CCACCAAACT TCTTCATATT CTGCAAGGAG TAGCTAAGGC AGGAAGGACC GTTATTACGA CAATTCACCA ACCATCAAGC AGAATGTTTC ACATGTTCGA TAAGCTCTTA CTGATCTCAG AAGGGCACCC TGCCTTTTAC GGCAAAGCCA AAGAATCTAT GGAGTATTTC TCATCTTTGA GAATCTTACC TGAAATTGCA ATGAACCCAG CAGAGTTCTT GCTAGACTTG GCAACCGGAC AAGTGTCAGA CATTAGTCTA CCCGACGAAC TATTGTCTGC CAAAACCGCT CAGCCTGATT CTGAGGAAGT CTTAGTGAAA TACTTGAAAC AAAGGTACAA GACAGACTTG GAGCCAAAAG AGAAGGAAGA AAACCATAGA AATAGAAAGG CCCCAGAGCA TCTTCAAATA GCAATCCAAG TGAAGAAGGA TTGGACTCTT TCATGGTGGG ATCAGTTCTT GATTCTTTCA AGAAGAACAT TCAGAGAGCG GCGTAGAGAC TACTTTGATA AGCTAAGGCT AGTTCAATCA CTTGGTGTGG CCGTTGTGTT GGGTCTTCTC TGGTGGAAGT CAAAGACAGA TACAGAGGCG CACCTTAGAG ACCAAGTTGG TTTGATGTTC TATATCTGCA TCTTCTGGAC ATCATCATCA CTCTTTGGAG CGGTATATGT GTTCCCCTTC GAGAAGATCT ACCTGGTGAA AGAAAGAAAA GCAGACATGT ACAGACTAAG CGTGTATTAC GTATGCAGTA CACTATGTGA TATGGTGGCA CACGTTTTGT ACCCTACATT CTTCATGATC ATTGTCTACT TCATGGCTGG GTTCAATAGG ACCATCCCCT GCTTCCTTTT CACCGTGTTG ACTATACTAT TGATAGCCAT AACTAGCCAA GGAGCAGGAG AGTTCTTGGG AGCTTCAGTT TTGAGCATTA AGAGAGCTGG TATGATCGCC TCTTTGGTAC TAATGCTGTT TCTTCTAACC GGAGGTTACT ATGTTCAGCA CATACCCAAA TTCATGCAGT GGTTGAAGTA CTTGTCCTTC ATGCACTACG GCTTCAGGCT GCTATTGAAA GTTCAATACT CAGCGGACCA ACTTTTCGAA TGTGGGAGCA AAGGCGGGTG CAGGACACTG CAAAGCTCAT CGTCCTTTGA CACAGTCAAC TTGAATGGCG GCTTGCAAGA ACTGTGGGTT CTGCTTGCTA TGGCATTCGG CTACCGTCTC TGTGCATACT TCTGTCTTCG CAAGAAAATA AGTATTTGCC ATCTTTGA 
Length2058
Protein Sequence
Protein Residue
Map Locationscaffold_3: 5033930.. 5036686
Download Sequence
A.thaliana
AGI-codeAT3G13220.1
DescriptionABC-2 type transporter family protein
TAIR curator summaryEncodes a ATP-binding cassette transporter G26 (ABCG26) involved in tapetal cell and pollen development. Required for male fertility and pollen exine formation.
Alias[ABCG26][AtABCG26][MSR02][WBC27][ATP-binding cassette G26]
Gene coexpression
MR
MR Locus Description
8.3666 Ahg932789
15.9687 Ahg900543 PLATZ transcription factor family protein
17.1464 Ahg929883
30.315 Ahg937722
38.4968 Ahg474352 Initiation factor eIF-4 gamma, MA3
40.1497 Ahg476551
44.1588 Ahg951102 Ribosomal protein S19 family protein
46.3465 Ahg935403
49.8999 Ahg896399
73.0069 Ahg906271
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression