Detail



ID : Ahg318850

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|318850|fgenesh1_pm.C_scaffold_3001866
Sequence
ATGGCGAGGC CAACGGGGAA GCAGAATTAT GGGAGGGTTG TGTTAGTTTC ATGCCTCGCT CTTATAGCCG CCGGACTTGT TGCTGACTTT CTTTGGGCTT CTTCTCATCG TTTCTCCTCC GTTGGAATGT CTCTTCCCTC CTCCGTTACC ACTGGTAAAG ACACTGAGAA GAAGAAGAAG GATAAAGTTC GGGAAAGGAA ACTTTCTGCA ACGTTTCAAG ATTTAGCTGC TCCTGAACTC AAATGGGAGA AGATGACAGC TGCTCCTGTG CCTCGTCTTG ATGGAGCTGC GATTCAGATT AGGAATTTTC TATATGTGTT TGCTGGTTAC GGCACCATTG ATATTGTACA TTCCCATGTT GATATATACA ATTTCGTTGA TAATACATGG GGAGGAAGAT TTGATATGCC AAAAGAGATG GCACATTCAC ATTTAGGGAT GGTTACGGAT GGAAGATACA TCTACATTGT TACTGGTCAA TATGGTCCTC AATGTAGAGG GCCTACAGCT AAAACATTTG TGCTTGACAC TGATACAAAT TCGTGGAGTG ACTTTGTTCC TTTTCCAGTT CCTAGGTATG CTCCAGCTAC TCAGCTATGG AGAGGAAGAC TCCACGTGAT GGGTGGAAGC AAGGAGAATC GGCACACACC AGGGCTTGAA CACTGGAGTA TTGCAGTAAA AGATGGGAAA GCAATGGAAA AGGAGTGGAG AAGTGAAATT CCAATCCCTC GTGGAGGACC TCACAGAGCA TGTGTGGTAG TGGATGACCG GCTTTTTGTC ATTGGTGGTC AAGAAGGTGA TTTCATGGCT AAACCAGGAT CTCCTATTTT CAAATGCTCA CGCCGTATGG AGGTGGTGTT CAGTGATGTC TACATGCTGG ATGAGGAAAT GAAGTGGAAA GTTATGCCAT CGATGCCAAA ACCCGATTCC CATATTGAAT TTGCTTGGAA AGTTGTTAAC AACTCCATTG TAATCGTTGG AGGCACCACA GAGAAGCATC CTGAAACCAA AAAGATGGTC CTTGTTGGTG AAATCTTCCA GTTCAACCTG AATACAATGA AATGGTATGT GATTGGAAAG TTGCCATACC GTGTGAAGAC TACGCTGGTT GGGTATTGGG AGGGGCAGTT ATACTTCACC TCGGGGCAAC GAGACAAAGG GCCAGATGAT CCCGCACCGC GTAAGGTGAT GGCAGAGATG TGGAGAACCA AACTGATATT GAATCCATGA 
Length1230
Protein Sequence
Protein Residue
Map Locationscaffold_3: 8788152.. 8790107
Download Sequence
A.thaliana
AGI-codeAT1G51540.1
DescriptionGalactose oxidase/kelch repeat superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
30.692 Ahg483259 Protein of unknown function (DUF288)
37.2156 Ahg471077 U2 small nuclear ribonucleoprotein A
46.6047 Ahg338326 Dynamin related protein 4C
51.2738 Ahg477563
60.9918 Ahg495581 Uncharacterised protein family (UPF0497)
62.0484 Ahg930074 proton gradient regulation 7
68.9565 Ahg497408 ELMO/CED-12 family protein
73.2666 Ahg951932 gamma-glutamyl hydrolase 2
85.44 Ahg487814 26S proteasome regulatory subunit, putative (RPN5)
99.6995 Ahg929675 nuclear RNA polymerase D2B
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression