Detail


ID : Ahg318914

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|318914|fgenesh1_pm.C_scaffold_3001930
Sequence
ATGTCGAATT GGAGACATAA AGTGTGGAGA AATTTGAGCT CAATTCAAGG ATCTTGTTAC TCAACTACGC CTTCAAGAAC CAACAAAATA AAGCTTGATG ACCTTAGAAA AATCCGGCCA ATGATTCTAA GGAGAATCGA AAATCGAGCA AAAGATTACC CGGTTAAAGA GATTGTTCCT GTGGCTGAAG AAATCCTTAT AGCTAGAAAG AATCTACTCA GTAATGTCAC TGCGCTTCTT AAAGTGTTTC CTGTCTTGAC ATGCAAATTC TGCTCAGAAG TTTTTGTTGG TAAAGAAGGA CACTTGATTG AGACATGTCG TAGTTATATA AGGCGTGGTA ACAATAGGCT ACACGAATGG GTTCCAGGTT CCATAAACGA TATACTTGTG CCCGTCGAAT CTTATCACTT ACACAACATT TCTCAAGGTG TTATCAGACA CCAACATAGG TTTGATTATG ATCGTGTTCC CGCAATCTTG GAACTATGTT GTCAAGCAGG AGCCATCCAT CCCGAAGAAA TCCTGCAATA TTCGAAAATT CATGATAACC CGCAAATCTC TGATGAAGAT ATCAGGAGTT TACCCGCTGG AGATCTCAAA TATGTTGGGA CAAACGCTCT AATGGCGTGG GAGAAAGTGA GAGCTGGTGT AAAGAAACTA TTGCTTGTTT ATCCTTCAAA AGTTTGCAAA CGGTGCAAGG AGGTTCACGT GGGTCCGAGT GGTCATAAAG CTCGGCTATG TGGTGTGTTC AAATACGAGA GTTGGCGCGG CACTCATTAC TGGGAAAAAG CCGGTGTGAA CGATTTGGTA CCCGAGAAAG TGGTGTGGCA CCGGAGGCCT CAGGACCCAG TGGTTCTTGT TGACGAAGGG CGGAGTTATT ATGGACATGC CCCTGCTATT GTGAGCCTTT GTAGCCATGC CGGTGCCATT GTTCCTGTAA AATACGCTTG CAAGATGAAG CCCCAAGGTT TATCTTTTTC TTTCACTTAT TCAGTTCCAA ATCTCGAAAC ATAG
Length1014
Protein Sequence
Protein Residue
Map Locationscaffold_3: 9084889.. 9085992
Download Sequence
A.thaliana
AGI-codeAT3G21740.1
DescriptionArabidopsis thaliana protein of unknown function (DUF794)
TAIR curator summaryACCUMULATION OF PHOTOSYSTEM ONE 4
Alias[APO4][ACCUMULATION OF PHOTOSYSTEM ONE 4]
Gene coexpression
MR
MR Locus Description
9.48683 Ahg473420 heat shock transcription factor A1D
24.0208 Ahg313324 Mediator complex, subunit Med10
27.9821 Ahg936279 Integrase-type DNA-binding superfamily protein
29.6648 Ahg354257 Tetratricopeptide repeat (TPR)-like superfamily protein
29.8496 Ahg496096 Chaperone DnaJ-domain superfamily protein
36.6606 Ahg927247
42.638 Ahg323163
42.7317 Ahg488026 SCP1-like small phosphatase 5
46.6369 Ahg486406
57.3324 Ahg949551 Pentatricopeptide repeat (PPR) superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression