Detail



ID : Ahg318974

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|318974|fgenesh1_pm.C_scaffold_3001990
Sequence
ATGCACACAT ACTGTTCTGG TGATGCTAGT TCACGTGTGC GTCACTTAGG CCTACACAAA GCTCTCTGTG TATTGATGGG ATGGAATTTC TCAAAGGCTC CTGATAATTC AAAGGCATAC CAGAATCTAC CTGCTGAAGA GGCAGCAATC AATCAAGCCC AGCTGATTAT TTGGCCACCT CATGTTATTG TTCATAACAC CAGTACAGGG AAGGGTAAAG AAGGGCGCAT GGAAGGCTTT GGAAACAAAA CAATGGATAA CAGAATTAGA GAACTAGGAC TCACTGGTGG GAAATCAAAG TCACTGTATG GAAGAGAGGG TCATTTGGGA ATTACATTGT TCAAGTTTGC GGGAGACGAT TCAGGGCTCA GGGACGCTAT GAGAATGGCA GAATATTTTG AGAAGATAAA CCGTGGGCGT AAGAGTTGGG GTAGGGTACA AACACTCACT CCAAGCAAAG ATGATGAGCA AAACCCTAGT CTTGTCGAGG TTGATGGGAG GACAGGTGAG AAAAAGAGGA TCTTTTATGG CTATCTTGCT ACTGTAACAG ACTTGGACAA AGTCGATATG GAGACAAAGA AGAAGACCAC AATAGAGAGC CTTAGAGAAC TCACAGGAAC AAAGTAA 
Length627
Protein Sequence
Protein Residue
Map Locationscaffold_3: 9452112.. 9453535
Download Sequence
A.thaliana
AGI-codeAT3G22430.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
11.3137 Ahg937129 metalloendopeptidases;zinc ion binding;DNA binding
12.3693 Ahg925855 Protein with RING/U-box and TRAF-like domains
14.4222 Ahg892834 ssDNA-binding transcriptional regulator
40.1622 Ahg481908 alternative NAD(P)H dehydrogenase 2
40.4969 Ahg922025 alpha/beta-Hydrolases superfamily protein
47.3286 Ahg479422 histone acetyltransferase of the TAFII250 family 2
57.3411 Ahg949231 B-box type zinc finger protein with CCT domain
59.5147 Ahg927794 heat shock transcription factor A1E
59.7997 Ahg494051 EID1-like 2
60.7947 Ahg483906 ribonuclease Ps
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression