Detail



ID : Ahg319015

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|319015|fgenesh1_pm.C_scaffold_3002031
Sequence
ATGGGGACAC GAGTAGCGAT AGTTGGGCCT AACGGAGCTG GAAAGTCGAC TCTTTTGAAT CTTATTGCGG GAGATTTAGT TCCGACTGAG GGTGAAGTGA GAAGAAGCCA GAAGCTGAGG ATCGGCAGGT ACTCGCAGCA CTTTGTTGAT CAGTTATCAA TGTGGGAGAC ACCGGTTGAG TATCTTCTTC GTCTGTATCC TGACCAAGAG GGATGTAGCA AACAAGAGGC GGTGCGTGCA AAACTGGGCA AGTTTGGGCT AACAGGTGAA AACCATTCAA CTCCAACTGC GAAATTGTCT GGAGGACAAA AGGCTAGGGT TGTGTTAACC TCAATCTCAA TGTCGAAGCC ACACATTTTG CTTCTTGACG AGCCAACAAA TCACCTCGAC ATGCAGACGA TAGATGCCTT GGCGGATGCA CTAGATGAGT TCAAAGGAGG AGTTGTGTTG GTGAGCCACG ACTCGAGACT CATAAGCCGT GTCTGTGAGG ATGAGGAGAA GAGTGAAATT TGGCTTGTGG AAAACGGGAC AGTGACTTTC TTCCGAGGCA CGTTTGAAGA GTACAAAGAA GAACTCATTG GAGAAATCAA AGCAGAGGTT GATGAGTTAA CTTCTCTTGT TGGCTGCTAA 
Length630
Protein Sequence
Protein Residue
Map Locationscaffold_3: 9694313.. 9694942
Download Sequence
A.thaliana
AGI-codeAT3G54540.1
Descriptiongeneral control non-repressible 4
TAIR curator summarymember of GCN subfamily
Alias[ABCF4][ATGCN4][GCN4][ATP-binding cassette F4][general control non-repressible 4]
Gene coexpression
MR
MR Locus Description
1 Ahg333316 general control non-repressible 4
16.5831 Ahg932747
16.5831 Virus0896
18.0278 Ahg332600 Plant neutral invertase family protein
43.8976 Ahg923832 downregulated in DIF1 11
49.295 Ahg950261
49.4773 Ahg944991 low-molecular-weight cysteine-rich 63
50.4975 Ahg896271
53.3854 Ahg900544
61.6523 Ahg935938
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression