Detail



ID : Ahg333316

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|333316|fgenesh1_pm.C_scaffold_396000001
Sequence
ATGGGGACAC GAGTAGCGAT AGTTGGGCCT AACGGAGCTG GAAAGTCGAC TCTTTTGAAT CTTATTGCGG GAGATTTAGT TCCGAGTGAG GGTGAAGTGA GAAGAAGCCA GAAGCTGAGG ATCGGCAGGT ACTCGCAGCA CTTTGTTGAT CAGTTATCAA TGTGGGAGAC ACCGGTTGAG TATCTTCTTC GTCTGTATCC TGACCAAGAG GGATGTAGCA AACAAGAGGC GGTGCGTGCA AAACTGGGCA AGTTTGGGCT AACAGGTGAA AACCATTCAA CTCCAACTGC GAAATTGTCT GGAGGACAAA AGGCTAGGGT TGTGTTAACC TCAATCTCAA TGTCGAAGCC ACACATTTTG CTTCTTGACG AGCCAACAAA TCACCTCGAC ATGCAGACGA TAGATGCCTT GGCGGATGCA CTAGATGAGT TCAAAGGAGG AGTTGTGTTG GTCAGCCACG ACTCGAGACT CATAAGCCGT GTCTGTGAGG ATGAGGAGAA GAGTGAAATT TGGCTTGTGG AAGACGGGAC AGTGACTTTC TTCCGAGGCA CGTTTGAAGA GTACAAAGAA GAACTCATTG GAGAAATCAA AGCAGAGGTT GATGAGTTAA CTTCTCTTGT TGGCTGCTAA 
Length630
Protein Sequence
Protein Residue
Map Locationscaffold_396: 861.. 1490
Download Sequence
A.thaliana
AGI-codeAT3G54540.1
Descriptiongeneral control non-repressible 4
TAIR curator summarymember of GCN subfamily
Alias[ABCF4][ATGCN4][GCN4][ATP-binding cassette F4][general control non-repressible 4]
Gene coexpression
MR
MR Locus Description
1 Ahg319015 general control non-repressible 4
8.77496 Ahg950453 myb domain protein 36
18.868 Ahg497390 Plant self-incompatibility protein S1 family
20.6155 Ahg485044
27.6586 Ahg335587 Plant-specific transcription factor YABBY family protein
27.7489 Ahg920931
30 Ahg333307
30.9839 Ahg947206
33.541 Ahg949383
34.0588 Ahg942771
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression