Detail



ID : Ahg319113

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|319113|fgenesh1_pm.C_scaffold_3002129
Sequence
ATGGCAACTC GTCTTCGGTT TGAGAACAGA CCTGACATTG GTGTCTTCTC CAAACTCACT AATGCCTATT GCTTAGTCGC TATAGGTGGC TCTGAGAACT TTTACAGCAC ATGCATGTTA TCCCTATTGT TAAGACATCT ATTGGTGGAA TACAAAGAAA CAAAAATGGG CTTCTTGTGC CTCATACAAC CACTGACCAA GCTTCAACAC TTGAGGAACA GTCTACCTGA TCAAGTTGTG GTCCAGAGAA TCGATGAACG TCTCTCTGCT CTTGGAAATT GCATTGCCTG CAATGACCAT GTTGCTCTTG CGCACACTGA TCTTGACAAG GAAACTGAGG AAATAATAAT AGCCGATGTT CTTGGTGTTG AAGTTTTCCG TCAGACAATT GCAGGCAATA TTCTTGTAGG CAGCTATTGT GCCTTGTCCA ACACCGGTGG AATTGTCCAT CCTCAAACCT CAGTGGAAGA TTTGGATCAA CTCTCAACAC TTGTTCAAGT CCCTCTGGTT GCGGGTATGA TCGTTAATGA CTGGACTGCT TTCTGCGGTT CAGACACAAC CGGAACAGAG CTCTCTGTTA TAGACAGCAT CTTCAAGCTA TTATCGACGA GATGA 
Length615
Protein Sequence
Protein Residue
Map Locationscaffold_3: 10687317.. 10688449
Download Sequence
A.thaliana
AGI-codeAT3G55620.1
DescriptionTranslation initiation factor IF6
TAIR curator summary
Alias[eIF6A][emb1624][eukaryotic initiation facor 6A][embryo defective 1624]
Gene coexpression
MR
MR Locus Description
3.4641 Ahg489955 Disease resistance-responsive (dirigent-like protein) family protein
5.09902 Ahg946832
5.65685 Ahg933966 ralf-like 19
6.08276 Ahg905519 CDPK-related kinase
7.34847 Ahg494794 SAUR-like auxin-responsive protein family
8.48528 Ahg934328 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
8.83176 Ahg943063
15.8114 Ahg887561 Protein of Unknown Function (DUF239)
15.9687 Ahg934445
17.4929 Ahg493651
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression