Detail



ID : Ahg319239

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|319239|fgenesh1_pm.C_scaffold_3002255
Sequence
ATGGAAGAGC CATTTCTTCC GGAAGATGAG CAGCTAGTCC CCTGTAAAGC CACATGGCAA AATGGTCAGC TCAACGTCGA GCTGAAGAAA GTGAGCCGCT TGGCCGCTCC AATGGCCACC GTGACCATTG CTCAGTACTT ATTGCCTGTC ATCTCAGTCA TGGTCGCCGG TCACAACGGC GAGCTCCAGC TGTCCGGTGT CGCTCTTGCC ACATCCTTCA CAAACGTCTC CGGTTTCAGC ATTATGTATG GGTTAGTGGG TGCACTAGAA ACACTTTGTG GCCAAGCTTA TGGAGCCAAA CAATACGAAA AACTCGGAAC CTATACATAC TCTGCAATTG CCTCTAACAT CCCTATTTGT GTCCTCATAT CAATTCTCTG GATTTACATC GAAAAGCTAT TAATCTCTCT CGGTCAAGAC CCTGACATCT CCAGAGTCGC TGGCTCATAC GCCTTGTGGC TCATACCGGC TTTGTTTGCT CATGCGATTG TCATACCACT GACCCGGTTT CTACTAGCAC AAGGGTTGGT TCTTCCCCTG CTCTACTCTG CACTGACCAC CCTTTTGTTC CACATGGCGG TTTGCTGGAC TTTGGTTTCC GCGCTTGGTC TGGGAAGCAA TGGAGCTGCC CTAGCTATTA GTGTGTCTTT CTGGTTTTAC GCTGTGATTC TCTCATGTTA TGTGAGATCC TCCAGCTCTT GTGAGAAGAC TCGCGGATTT GTATCCGGAG ATATCGTGTC TTCTGTCAAG CAGTTCTTCC ATTACGGAGT CCCATCAGCC GCAATGCTTT GCCTAGAATG GTGGCTATTT GAGCTACTTA TACTCTGTTC AGGTCTTCTC CCGAACCCAA AACTCGAGAC CTCTGTTCTT TCTATTTGTC TTACAACAGC AACTTTGCAC TATGTGATTC CAGTTGGAGT CGCAGCGGCT GTTAGCACAC GTGTGTCAAA CAAATTGGGA GCTGGAAATC CTCAAGTTGC TAGGGTTTCA GTATTGGCAG GGCTTTGTCT CTGGCTGGTA GAGTCAGCTT TCTTTAGCAC ACTTCTCTTC ACATGCAGGA ACATCATAGG CTACGCATTC AGCAACAGCA AAGAAGTTGT GGACTATGTG GCTGACCTAA CTCCTTTGCT CTGTCTCTCC TTTGTTCTCG ACGGATTTAC CGCAGTTCTT AATGGGGTTG CTAGGGGCAG TGGTTGGCAG CACATTGGAG CTTTGAACAA TGTGTTAGCT TATTATATCG TAGGTGCCCC GGTTGGAGTT TACTTAGCTT TCAGTCGTGA GTTGAACGGA AAAGGACTTT GGTGTGGTGT TGTGGTTGGA TCCGCTGTGC AAGCCATTAT ACTGTCTTTC GTCACATGTT CCATAAATTG GAAGGAACAG GCTGAGAAGG CTAGGAAGAG AATAATCTCA ACTGAAAATG GATTGGCTTA A 
Length1431
Protein Sequence
Protein Residue
Map Locationscaffold_3: 12264959.. 12266840
Download Sequence
A.thaliana
AGI-codeAT2G04070.1
DescriptionMATE efflux family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
15.6205 Ahg930722 MATE efflux family protein
19.3907 Ahg488135 Uncharacterised conserved protein UCP015417, vWA
30.8221 Ahg484459 Cytochrome P450 superfamily protein
31.9374 Ahg907291 S-locus lectin protein kinase family protein
34.176 Ahg936852
43.2666 Ahg472361 Protein kinase family protein
49.2341 Ahg909804 plant U-box 54
49.7192 Ahg481994 cytochrome P450, family 71, subfamily A, polypeptide 13
50.3488 Ahg941387 Protein kinase superfamily protein
54.4059 Ahg471753 pleiotropic drug resistance 12
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression