Detail



ID : Ahg319434

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|319434|fgenesh1_pm.C_scaffold_3002450
Sequence
ATGGAACAAG GATCGTCCCG TGGCTTTATT TGGCTGATTC TATTTCTCGA TTTGGTTCTC AGAGTCACCG GAAACACACA AGTTGATGCT CTATCTGCTC TAAGAGTCAG TTTATCTGAC CCTAACAATG TACTTCAAAG CTGGAATGTC ACTCATGTTA CTCCATGTTC ATGGGTTTAT ATAACTTGCA ATAGTGAAAA CAGTGTTACT CGTGTTGACC TGGGAAATGT TAATCTATCT GGAGAACTGG TGCCACAGCT TGGTCAGCTT CCAAACTTGC AGTACTTGGA GCTTTATAGC AATAACATTA CTGGGGAGAT ACCTGAGGAG CTTGGCAACT TGATGGAACT AGTAAGCTTG GATCTTTACG CGAACAGCAT AAGTGGTCCC ATCCCTTCGT CTCTTGGCAA ACTAGGAAAA CTCCGGTTCT TGCGTCTTAA TAACAACAGC TTATCTGGAG AAATTCCAAG GTCTTTGACT GCTGTGCCAC TGCAGGATCT GGATGTCTCA AACAATCGGC TCAGTGGAGA TATTCCTGTA AATGGTTCTT TTTCGCAGTT CACTTCTATT AGTTTTGCCA ATAATAATTT AAGGCCGCGA CCTGCATCTT CACCACCATC ACCTTCAGGA ATGACTGCAG CAATAGCAGG GGGAGTTGTT GCAGGTGCGG CACTTCTATT TGCGCTTGCT TGGTGGATGA AAAGAAAACT GCAGGATCAC TTTTTTGATG TACCTGTTGA GGAAGATCCA GAGGTTCATT TAGGACAATT TAAAAGGTTT TCCTTGCGTG AACTGCTAGT TGCTACAGAG AAATTTAGCA AAAGAAATGT ATTGGGTGAA GGACGTTTTG GTAAAGTGTA TAAAGGACGT TTAGCCGATG GCTCTCTAGT GGCTGTGAAA AGGCTAAGAG AAGAATGTAC CAAGGGTAGG AAACTGCAGT TCCAAACTGA GGTTGAGATG ATCAGTATGG CCGTTCATAG GAACTTGCTT CGGCTTCATG GTTTTTGCAT GACTCCAACT GAAAGATTAC TTGTTTATCC CTACATGGCT AATGGAAGTG TTGCTTCTTG TTTAAAAGAA CGTCCTGAAG GCAATCCACC ACTTGATTGG GCAAAAAGAA AGAATATTGC TTTGGGATCA GCAAGGGGGC TCGCGTATCT ACATGATCAT GGCAACCAAA AAATCATTCA CCGGGATGTG AAAGCTGCGA ATATATTGTT AGATGAAGAG TTTGAAGCTG TTGTTGGAGA TTTTGGGCTC GCAAAATTAA TGAATTATAA CGACTCCCAT GTGACAACTG CGGTACGCGG TACATTTGGC CATATAGCTC CTGAGTACTT TTCGACAGGA AAATCTTCTG AGAAAACTGA TGTTTTTGGA TACGGGGTCA TGCTTCTCGA GCTCATCACT GGACAGAAAG CTTTCGATCT TGCTCGGCTT GCTAATGATG ATGATATCAT GTTACTCGAC TGGGTGAAAG AGGTTTTGAA AGAGAAGAAG TTGGAAAGCC TTGTTGACGC AGAGCTTGAA GGAAAGTACG TGGAAACAGA AGTGGAGCAG CTGATTCAAA TGGCTCTGCT CTGCACTCAA AGTTCTGCGA TGGAACGTCC CAAGATGTCA GAAGTAGTGA GAATGCTGGA AGGAGATGGT TTAGCTGAGC GATGGGAAGA CTGGCAAAAG GAGGAGATGC CAATACATGA TTTTAATTAT CAAGCCTATC CTCATGCTGG CACTGACTGG CTCATCCCCT ATTCCAATTC CCTTATCGAA AACGATTACC CCTCAGGTCC AAGATAA 
Length1797
Protein Sequence
Protein Residue
Map Locationscaffold_3: 17472248.. 17476171
Download Sequence
A.thaliana
AGI-codeAT2G13800.1
Descriptionsomatic embryogenesis receptor-like kinase 5
TAIR curator summary
Alias[ATSERK5][BAK8][SERK5][SOMATIC EMBRYOGENESIS RECEPTOR LIKE KINASE 5][BRI1- ASSOCIATED KINASE 8][somatic embryogenesis receptor-like kinase 5]
Gene coexpression
MR
MR Locus Description
15.4919 Ahg491097 Protein kinase superfamily protein
18.2209 Ahg495340 Heavy metal transport/detoxification superfamily protein
33.4664 Ahg915669 Glutathione S-transferase family protein
37.6298 Ahg495588 GDSL-like Lipase/Acylhydrolase superfamily protein
37.9473 Ahg942923 UDP-D-glucose/UDP-D-galactose 4-epimerase 5
43.359 Ahg496280 glucuronidase 1
50.8429 Ahg331636 Copper transport protein family
52.7636 Ahg472361 Protein kinase family protein
60.5805 Ahg491260 UDP-glucosyltransferase 73B2
63.6396 Ahg487487 Protein phosphatase 2C family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression