Detail



ID : Ahg320214

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|320214|fgenesh1_pm.C_scaffold_4000271
Sequence
ATGGCTAAGC AGCAGAAATC GGTAACAGAT GCTACAAGAC CGCCTCTTGT TCCAACTGAG AAGAACAATG CGGTTGTTGT GACGCGCCGT GCTAGAACAA TGGAGGTTAG TTTAAGATAC AGATCACCTA CTCCTACTAA AACTCGGAGA TGTCCTTCAC CTAATGTCAC CAGGACTGTG TCTCCTTCAG CCTCTCAATC TCTGTCGAAA AGAGCTGTTT CAGCGGAAAG GAAACGTGGT CCTTCGACAC CAACTACTCC GTCTACACCG GTTAGTGATG TATTGATAGA TTTACCGGTT TCTTCTAGGA GACTATCTAC TGGTCGTTTA CCTGAAAGCT TATGGCCTTC TACTATGAGA AGCCTCAGTG TTTCTTTTCA GTCGGATTCA GTCTCAGTGC CTGTTAGTAA GAAGGAGAAA CCGCTTGTTA CTTCTTCGAT TGATCGGACA TTGAGACCGT CTTCTTCGAA TATAGCGCAT AAGCAGCAGA ATGAGACAAC CTCTGTGTCG CCTAAACATA TGCCCGAGAG GAAAAGAAGT CCACTGAAGG GAAAGAATGT GTCTTCTGGT CAATCAGAGA ATTCAAAACC TGTGGATGGT TCTTCTCATA GTAGGTTAAT ACCACCACAG CATCGATGGC CTAGTCGAAT TAGGGGGAAC AGAAGCTTTG ATCTTGGCGA TAAAGCGGTC AGGAGAGTGT CATTGCCTTT GTCCAAGAAA AGCTCTAAAC CTTTGCATTA TAAGTCTTCT AGTGACATAG AAAGGTTGTT GTCTTGTTAT GAAAATGGTG GACTAGAAGT TTTGTCTTCA ACAACTTCAG AAGATAGTAG TAGCACTGAG TCTCTCAAGC TTTTTTCTGC AAGTTCGTTA CCTAGGTTGC ATCCAATGTC TGCTCCTGGA TCACGCGCTG CTTCACCAAG CAGATCCTCA TTTTCATCAT CATCCTCTAA TTCTCGAGGC ATGAGTCCTT CAAGAGGAGT GAGTCCTATG AGAGGATTGA GTCCTTCAAG AGTGGGAAAC CGCTCTTTTG TGAGATCGTC TACACCGCCA TCAAGAGGTG TAAGTCCTTC CCCGATAAGA CAAATCGCGC AATCCAGTAG TAACACAACC TCGGTTCTTA GCTTCATTGC GGATGTCAAG AAAGGAAAAA AAGCGACTTA CATTGAAGAT GTTCATCAAC TACGCTTGCT CTATAACAGA TATTCGCAAT GGCGGTTTGC AAATGCTCGA GCTGAGGGAG TTAGCTATAT TCAAAGCTTA ATAGCTGAGG AAACACTATA CAATGTTTGG CATGCAATAT CAGACTTAAG GGATCTCGTG ACAACACAAA GAATTTGTCT CCAACAGTTG AAGCTAGAAA TCAAGCTAGA ATCCATCTTA AATGATCAGA TGGTTTGCCT TGAGGATTGG GCCATGCTTG AGAGAGAACA CATTAGTTCT TTAGCTGGAA CAATTGGGGA CTTGGAAGCA AATACACTTC GGCTTCCACT AGCCGGAGGA ACAAAGGCGG ACCTCGGATC TCTGAAGTTA GCTATGTCCT CAGCTCTTGA TGTAATGCAG AGTATGGGAT CATCCATCTG GTCTCTACAC TCGCAAATGG AGGAAATGAA TAAACTTGTT TCGGATCTCG CTGTTATAGC TAAAAAGGAG AACTTTTTGC TTGACAAATG CGAAAATCTT CTGACATCAA CTGCAGTCAT GGAGATAGAA GAGAGAAGCC TCAAGACTCA TATGATACAA AAGAAGAAAG AAGCAGAAGA AGTAAGAAAT GATGCAGAGT CTCCATTATT GACATTAAGC AAGATTCCAT GGCCTTAA 
Length1818
Protein Sequence
Protein Residue
Map Locationscaffold_4: 2147265.. 2149400
Download Sequence
A.thaliana
AGI-codeAT2G24070.1
DescriptionFamily of unknown function (DUF566)
TAIR curator summary
Alias[QWRF4][QWRF domain containing 4]
Gene coexpression
MR
MR Locus Description
19.2873 Ahg909597 Cation efflux family protein
23.8118 Ahg931163
36 Virus3817
46.5403 Ahg338733
58.6345 Ahg945828 FIZZY-related 2
66.7083 Ahg922908 UBX domain-containing protein
71.1196 Ahg323748 serine carboxypeptidase-like 36
73.1984 Ahg925795 myb domain protein 90
81.9756 Ahg935409 LOB domain-containing protein 19
88.9944 Ahg490847 Tetratricopeptide repeat (TPR)-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression