| Annotation |
|---|
| Description | jgi|Araly1|321523|fgenesh1_pm.C_scaffold_4001580 |
| Sequence |
ATGGACTCAG CTCCTTCTCC ATCATCGCCG GACCTTGAAT CATCTCCTCC GGTATTGGTC ACAATGAATT CAACCTCATC TTCTTCTGAT AATAACGTCG AAGGAGATGA TGATGATGCT GCTAATCATG AGATTTTCAA TTGGAGAGAA TTTTCCTCTT GTTGGAGAGT TTCAGAGTCG AACTTGTACT GCTTTAGTTT GGCTCTTCTT GTCTGGTTCT TTGCTTCGTT TATTCTGATT GAGAATCTTT ACGGACCAAA AAGTGTCTGG CTTGGACCCA ATTCTTCCAT TCTCGTTGAA CCAAGCTCCA TTTTTGTCAA AAGCATTAAG GTTGTTAAAG TGTTAGATTA TTCTAAACCA GGGCTTCAGT TATATGGGTT CTATAGATCT CCTGCTCTGG ATTGTTTCGT CAATTGGTCG GAATCCCGAG TGTTACCTGT ATGGCCATAT TATCTCAACA GACGGACTTT GTTGAATATT ACATATACCG TTAAACCACA AGGTTCTGCG GTTCAGCTTG TGGTTGACGA AGGACATCAA GGCGACCCTC AGTCGTTTTT GAACGACCCT GCATATCGTT ACAAAGTTTG GTCATGGAAT CTAATTGAGG GGAGTGGTAT GATTGAATTG GAGATAAGAA AGTCTTCAAG TTATTATCTT GCTGTAGCTA ACTTGAAGAC GAAAGACGTA GAGGTGGAAC TGAATATTGA TGTGAAGGCT GTCTTGTATG ATACTAAACA ATCATTCTAT AACTGTAACT TCAGCAATGG CGAGTGCACA TTCAATGTTA TGCCCCTTGT TGGAAATTCT GTTGTCGTAA CTTCACCAGC AGTGAGTCAG GGAGTATCCA TTGAAGATGA ATGGTATATC AGGTTCTCAT ATCAACCTAG AGAAATTGCA TATGTAATCG GCACAGGTGT GGTGATTTGC TTCATGTTGG TAGCTATACA ATTCTGCAAC AGATTACAAT GCTATGGTGG AGAGGGACAT CTAACCGAGA ATGATTCAGG GAGAACACGT CTACTTGAAA ACAAAGATGA TGATGGTTCA AGCATGGGTT CATGTAATGA TTCTTTCGCA AACGATGATG CTGATTTAGA AGAGTTTATG GGAAATGATG GTGAAGCAAG TAACCGAAGT AGACGTCTCT GTGCCATTTG TTTTGATGCT CCAAGAGATT GCTTTTTCCT CCCATGTGGC CATAGCGTCT CCTGTTATGA ATGCGGAACA ACGATGCAAG AAGCTGATGG GAGTTGTCCA ATCTGTAGAA GGAAAATGAA GAAAGTGAAG CGAATCTTTA CAGTGCAATC TCCCCTCCAA CACACACAAC CATCTCCAAT GGATACATTT CTGTCTCTTT CTCTTGATAT CTTTCTTGAC CACCACCTCA CTCCGAAGAA GATTTCGATG ACATCATCGA TTGTGGCGAA ACTTCGTGGG GGCTGTTTAG CGTGTCTTGC TTTATTGGCG TTATGGGTTT ATGGTTCATT GGTTGCGTCG GTTTTTCTGA TGTTCGGTTT TTACGGTGAT GCAAAAGTCT GGCTTGGACC TCACTCGTCA GTTCTTGTTG AACCAAGTTC CATTTTTGTC AAAAGCATTA AGGTGAAGGA GCTTGACTTT ACAAAGCCTG GTCTTCAACT TTATGGATTC GATGATGAAT CTACTCCTAG TACTTATATT GTGAACTGGA CTGAATCTCG AGTGTTATCT GTCTCACAGA ATTCTTACAA GGCAGGTTCT GCAGCTCGGC TTGTGATGTC TGAAGGAATG CCAGGCATGT TTCGGTCGAC GTCGCTGGAG GATCTTGCAT TTTGTGACAG AGCTTGGTCA TGGAATCTAA TTCAGGGGAG TGGTATGATT GAATTGGAGA TAAGTAAGTC TACAGGTTAT TATCTTACTG TGGCTAACTC GAAGAGGAAG GACGTAGAGG TGGAACTGGA TTTTGATGTG AGAGCTGTCT TATATGATAC TAATCAATCA TCCTACAACT GTACCTTCAG CAATGGCGAG TGCGCATTCA AAACCAATGA AATGTCCCCT GTTGAAAATT ATGCTGTCGT AACTTCACCA GCACTGGGTC AGGGAGTATC TATCGAGGAT GAATGGTATA TCGAGTTGTC ATATCAACCT AGATGGATTG CATATATAAG CTTCACAGGT ATTTTGTTTA GCTTCATGCT GGTAGCTATA CATTTCTGCA ACAAGTTACA GTGCAGTGGT GGAGAGGGAC TTCTAACCGA AAATGATTCA GCGAGAACAC ATCTACTTGC AGACAAAGAT GATGATGATT CGTGTAATGA TGGCGAAGCA AGTAACAGAA GTAGATATGT CTGTGCCATT TGTTTTGATG CTCCAAGAGA TTGTTTTATC TTCCCGTGTG GCCATTGCGT CTCCTGTTAT CAGTGCGGAA CAAAGATAAA AAGAGCCAAG GGGAGGTGTC CAATATGTCG AAAGAAAATG ATGCTAGTGA AGCAAATCTA TACAGTGTAA |
| Length | 2490 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 17536621.. 17542772 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G38185.4 |
| Description | RING/U-box superfamily protein |
| TAIR curator summary | |
| Alias | [APD1][ABERRANT POLLEN DEVELOPMENT 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6.7082 |
Ahg477968 | DNA-binding enhancer protein-related |
| 15.6205 |
Ahg494098 | |
| 28.9137 |
Ahg910790 | Transducin/WD40 repeat-like superfamily protein |
| 35.6371 |
Ahg334747 | |
| 41.821 |
Ahg496494 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 50.3786 |
Ahg355185 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 50.9902 |
Ahg495487 | DNA mismatch repair protein MutS, type 2 |
| 53.9815 |
Ahg933914 | SU(VAR)3-9 homolog 2 |
| 54.4977 |
Ahg486004 | UDP-Glycosyltransferase superfamily protein |
| 59.3212 |
Ahg483241 | Nucleoporin interacting component (Nup93/Nic96-like) family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|