Detail



ID : Ahg321927

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|321927|fgenesh1_pm.C_scaffold_4001984
Sequence
ATGGAGAATC ATGAGCAGAC GAGTTTCAGG TTTGAGATAG ATAACTTCTT GGAGAAGCGA GATGTGATAT CTCCTAATTT CATAAGCGGG GGATGCGAAT GGTTTGTTAG GGTTTGGCAA ATTGAAGATC ACTTGGCTGT GAGTCTGAGC GTTCCGAATC TTGAATCCTT ACTACATGGA TGCGAAAGGA GAGCTAAGTA TTCATTCATT GTGTTGAATC AATCGGGCAA AGTGCTCGGA AGAACATTTG AAGCAGAAGG TCTCTTCTGT TTTGAGTTAT TAGATTGGTG TCATCCCAAA GTAATGCCTA TGACCAAGCT TCAAGAAGAT TGTTTAGAAA ATAACAAACT GATCATTGAA GTCCAATTAA AAGTAGTTGA AGTTGTTCAT GAAGGAGGGG TAACAACTGA GAAGAAGATG TTCAATATTG AGGGTTTCGA TGTTCTCTAT ACTCAGGTCT CTTGGGTTAG CTGGATTTTC GGGGAGCATC CAGACATTGC AGTAGATGTC AGAATAAAGA ACCAGTTGTT GAGGACAGCA TACATGAATG TTCTCCTCGG TCTTATAGAG ACGCTAGATA GGCCTCCACG GAGTCTTTCA GAGACTGAGC TTAGAGACGC TCACATCGAG TTGAGCGAGC TAACAGAAGC AGGATTCAAG GTGGATTGGT TAAAGACAAA GCTTGAGGAG GTTTCCTTGG TGAGGAAGGA TGAAATTTCT GATAGTTCTC AGGTCCAAGA ACTCGAGGAA CATGTCAGGA ATCTCAAACT TGAACTGGAC AATGAGAAGA CCAAATCTTC TATTGCTTCT GATAGAGTTT TGTTGTTGGA GAAAGAGGTG TCAGATCTCA AAATTGAACT GGACAAGGAG AGATCAGCCA AATCTCCTAT ATCTAAAGTT GCAGAAGCAT GCAACTTGTT CTGCGCTGAG GTCTCAGACC CGTGTTTCTC TAAGACATTG CCTCTTAGCA CGCTTGAAGA AGAAGGGTTT CTGGAGAACA ACAAACTAAC CATTGAAATC TACATTAAAG TTAAATCAGT GAGTTGGATC TTCGTGAAAC ACCCAGACAT TGCAGTAGGT TTCAGACCAA AGAACAAACT GGTGAAGAAA GCATATATGA ATATTCTCCT CGGCCTCATC GAGACACTGC GCAAGCCTCC TCTAAGCTTG TCTGAGACTG AGCTAAGAAA CGCTCACAGC GAGTTGACTA AGTTGATGGA AGTGAGCTTC AAGCTAGACT GGTTAAAAAC AAAGCTTGAG GAGGTTTCCT TGGAGAGGAA GAAAGCAGTT TCTGATGGTT CTCAGATAGG ATCAAACAAA TCTAAAAGTA ATTCCTCTGT TTCCTCCTCC CTAGCTCAAA GAAATACCAA AACCCTAAAA AAAAATAAAC AGATGGGAAC GCAATTCCGC AAAGCTTTAA CTTTGACGGT AACCAACTTC TCCCAAAAGA GTTCTCCAAT TAACTCTCCT CCGTTCCCTA GCGGTGGCTG CGATTGGTAT ATTAAAGTTT ATCCTAAGGG CAGTGTTGAT GATAATTACT TGTCTCTGTT CCTGTCTCCT GATGATCCTA AATCACTTGG ACTTAATTGG AAAAGGAGAG CTAATTTTTA CTTTGTTTTG CTGAATCAAT CAGGCAAAGA ACTTCATAGA ACACCTGAAA TAGGTGATCA AGTGTTTTGT GATGACTCAC TAAGCTGGGG TTTTCCACAG ACACTGCCTC GAAAAAAGCT TCTAGACAAA ATCTTTCTAG ATAACGATAG ATTCAACATT GAAATCTATA TTAAAGTTAT TGAAGTTGTT GAAGGATATC ATATGTTTCC AGCTTCATTC ACTAATAAGC TCTTAAGAAG TTGCTTAGAG TATCCAGATA AGTCTGAGAA GGAAACTGTA GATGTCAATG GTTTCCATGT TCTTTCCTCT CAGGTTACTT CAGTGAAGCA AATTTTCGAG GAGCATCCAG ATATTGCAGA AGATTTCAGA TCAAAGAACC AAGTAGTGAA GACAGAATAC ATGAATGTCC TTCTTAGGGT CATCCAGACA ATGGCTAAGC CGCCACAGAG TATCTCAGAG ACTGAGCTAA GCAACGTTCA TAGCGAATTG ACCGAGCTGA TGGAAGTAGG TTTCAAGGTG GAGTGGTTGA AGACAAAACT TGAGGAGGTT TCCGTGGAGT TGAAGAAAGC AAATGCTGAT GGGTGTCGGA TTCAACAACT TGAGGAACAC GTCAAGAATC TTGAGCTGAC TGTGTCAGAT CTCAAAGCTG AACTGGACAA AGAGAAGGCC AAATCTACTA GTGATACTGC TAAATTTTTG TCGTTGGAGG ATACATTGTC TGATCTCAAA ACTGAACTCG TTAAGGAGAA GGCAAAAAAT GCTAGTGCTA CTGATAAATT TTTGTTGTTG AAGGAGACTT ATTGTGATCT CAAAGTTGAA CTGGACAAGG AGAAGGCTAA ATCTACTAGG GCTGCTGCTA AAGTTTTGTC ATTGAAAGAG ACTTTGTCTG ATCTCAAAGT TGAACTGGAT CAGAAGATAG AAAATTCTGC TACTAGTACT GCTAATGTTT TGTCGTGGGA AGATGATGAT GATTTATTTT CACATACTAA CTGTCTAGGA ATTCAGCAGA AGACAAATGC TTACAAAAGA ATAAACTGA 
Length2649
Protein Sequence
Protein Residue
Map Locationscaffold_4: 19710042.. 19721466
Download Sequence
A.thaliana
AGI-codeAT2G42470.1
DescriptionTRAF-like family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
10.198 Ahg928281
18.1108 Ahg484658 Ankyrin repeat family protein
19.8746 Ahg938233 plastocyanin-like domain-containing protein
27.9285 Ahg948810
28.8791 Ahg334440 Pentatricopeptide repeat (PPR) superfamily protein
36.6606 Ahg487015 Protein of unknown function (DUF3741)
38.7298 Ahg344097
39.7618 Ahg919223 Protein of unknown function (DUF604)
51.5752 Ahg949167
52.6878 Ahg919270 Pectin lyase-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression