Detail



ID : Ahg322142

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|322142|fgenesh1_pm.C_scaffold_4002199
Sequence
ATGAGACTCT CTCTTTCTCC CGTACGTCCG CATAGTGTAC TAGTACCTTC ACTCCCAAAG CACGACGTCG TTTCTTATAT AAATGGTACG ACGTCGAATC GTCAATGTCG ATGTGTACTT ACTCTTCCTT CTCCTTCAGT TTCTACCTCC CGACCACCGG TTCTACCCAA ACCGGAAACC TGGGAGAGTT TGCTACTAAA CCAAGATCAT AGTTCCGGCG AATTCTCGCC CTCTGGTTCG AATAACCCGG TTAAGCTTGG CCGGAGATGG ATGGAGTACC AGGGGCTTCA AAATTGGGAT GGTCTTTTAG ACCCATTGGA CGAAAATCTC CGGCGTGAGA TTCTCCGGTA CGGTCAATTC GTCGAATCGG CTTATCAAGC GTTTGATTTC GATCCTTCTT CTCCAACCTA CGCGACATGC CGGTTTCCGA GGAGCACTTT GTTAGACCGA TCCGGTTTAC CTAATTCCGG TTATCGACTA ACGAAGAACC TTCGTGCCAC GTCAGGTATT AACTTGCCAC GTTGGATTGA GAAAGCGCCA AGCTGGATGG CTACACAATC CAGCTGGATT GGTTACGTGG CAGTTTGCCA AGACAAGGAA GAGATCTCAC GGCTTGGGCG TAGAGACGTC GTCATCTCCT TCCGTGGAAC CGCCACGTGT CTCGAATGGT TAGAGAACCT TCGCGCCACG CTGACTCATC TCCCTAATGG GCCTACTGGA CCAAATCTAA ACGGGTCTAA CTCTGGGCCC ATGGTCGAGA GCGGGTTTTT AAGCTTGTAC ACTTCAGGGG TTCACAGTTT GAGAGACATG GTCAGAGAAG AGATCTCAAG GCTACTCCAA TCTTACGGCG ACGAGCCGCT AAGTGTAACG ATAACCGGCC ACAGCCTCGG AGCTGCGATC GCGACACTAG CCGCGTATGA TATCAAAACG ACGTTTAAAC GTGCGCCGAT GGTTACCGTA ATATCTTTTG GAGGTCCACG TGTCGGAAAC AGATGCTTTC GGAAACTCCT TGAGAAGCAA GGCACGAAGG TTCTAAGAAT CGTGAACTCC GACGACGTTA TCACCAAAGT TCCTGGAGTC GTTTTAGAAA ACAGAGAGCA AGAGAACGTG AAGATGTCGA CGACTTCGAT AATGCCGAGC TGGATACAGA GACGCGTGGA GGAGACGCCG TGGGTTTACG CCGAGGTCGG TAAGGAGCTT AGGCTGAGCA GCCGTGACTC GCCGCACTTG AACAGCATCA ATGTGGCTAC GTGTCACGAG CTGAAAACGT ATTTACATTT GGTAGACGGG TTTGTGAGCT CCACGTGTCC ATTCAGAGAG ACGGCTCGGA GAGTTCTCCA TAGATGA 
Length1347
Protein Sequence
Protein Residue
Map Locationscaffold_4: 20711670.. 20713016
Download Sequence
A.thaliana
AGI-codeAT2G44810.1
Descriptionalpha/beta-Hydrolases superfamily protein
TAIR curator summaryMutant has defects in anther dehiscence, pollen maturation, and flower opening. The DAD1 protein is a chloroplastic phospholipase A1 that catalyzes the initial step of jasmonic acid biosynthesis.
Alias[DAD1][DEFECTIVE ANTHER DEHISCENCE 1]
Gene coexpression
MR
MR Locus Description
2.44949 Ahg496532 cytochrome P450, family 94, subfamily B, polypeptide 1
2.82843 Ahg936463 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
17.2916 Ahg475586 xyloglucan endotransglucosylase/hydrolase 17
20.2978 Ahg473473 HXXXD-type acyl-transferase family protein
30.3809 Ahg899732 casein kinase II beta chain 3
41.2311 Ahg924840 Receptor-like protein kinase-related family protein
44.4972 Ahg931852 RALF-like 13
48.9898 Ahg895265 glycine-rich protein
53.1601 Ahg894259 galactinol synthase 5
55.6956 Ahg326601 Putative membrane lipoprotein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression