Detail



ID : Ahg322371

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|322371|fgenesh1_pm.C_scaffold_4002428
Sequence
ATGAAGTGTT TCGCGGCAAA GGTGGAAGAA GGAGTTAAAG GGGAAGATGG AAAGCCATCG GTAGGCCCGG TGTACCGGAA TCTTTTGTCG GAGAAAGGTT TTCCTCCTCG AGATTCTGAT ATCACCACTA CTTGGGACAT TTTCAGTAAA TCTGTGGAGA AATTTCCTGA TAACAAGATG CTTGGATGGC GTCAAATTGT GGATGAGAAG GTTGGACCGT ATATGTGGAA AACGTACAAG GATATATACG AAGAAGTTCT CTTGATCGGT TCTGCACTAC GAGCCGTCGG AGCTGAACCT GGGTCTCGAG TGGGGATCTA TGGAGCTAAT TGTCCTCAGT GGATCATAGC AATGGAGGCT TGTGCAGCTC ACACTCTAAT ATGTGTACCT CTATATGATA CATTGGGTTC AGGAGCAGTC GATTATATCG TTGATCACGC GGAAATCGAT TTTGTGTTCG TCCAGAACAC CAAAATTAGA GGACTTCTTG AGCCAGATTG CAAAGGTGCA AAACGTCTAA AAGCTATAGT TTCTTTCACT AATGTGGGCG AAGAACAGAG CTACAAGGCT TTAGAAATTG GAGTCAAAGC ATACTCGTGG CTCGATTTTC TCCATATGGG ACAAGAGAAG CCGAAAGAGA CAAACCCGCC TAAACCGTCT GACGTGTGCA CCATAATGTA CACGAGCGGC ACAAGCGGTG AACCTAAAGG TGTGCTTTTG ACCCACGAAG CGGCCGCGAC TTGCGTCATT GGGGTGGATC TCTGCTTGGA CCAGTTCGAG GACAAGATGA CACATGAAGA TGTGTATCTC TCGTTTCTGC CGTTGGCTCA TATCCTCGAC CGTGCAAATG AGGAATATTT CTTCCGTAAA GGCGCTTCCG TTGGCTATTA CCATGGAGAT TTGAATGCGT TACACGATGA TATTCAAGAA CTGAAACCGA CTTTTCTTGC GGGAGTTCCA AGAGTCTTCG AGAGGATTTA TGATGGGATT CAGAAAGCTC TTCAGGAGCT TAACCCAAGA AGAAGACTCA TCTTCTATGC TCTCTATAAA TACAAACTTG CGTGGATGAA TCGTGGATAT TCTCACAGCA AAGCTTCACC CATGGCTGAC TTCATAGCTT TCAAAAAGAT TAAAAACCAA TTAGGAGGTA GAATTCGGTT GCTAGTATCT GGAGGAGCAC CACTGAGTCT TGAGATCGAA GAGTTCTTGA GAGTTACTTC TTGTTGCTTC GTCGTTCAAG GCTATGGTCT AACGGAGACG CTTGGAGGAA CAACTTTGGG TTACCCGGAC GAGATGTGTA TGCTCGGGAC GGTCGGTGTT CCAGCGGTTT ACAATGAGAT ACGGCTTGAG GAGGTTCCGG AAATGGAGTA TGACCCATTG GGAGAAAATC CGGCAGGGGA GATCTGTATA AGAGGAATAT GTCTGTTTTC TGGGTATTAC AAGAACCCTG AACTCACTGA AGAAGTCATG AAAGACGGAT GGTTCCATAC AGGAGACATA GGTGAGATTC TTCCAAACGG ATTACTTAAG ATCATCGATC GTAAGAAGAA CCTGATCAAA CTCTCTCAAG GAGAATATGT TGCTCTTGAA CATTTGGAAA GCATCTACGG ACAAAACCCT ATTGTCCAAG ATATATGGGT TTATGGAGAC AGCTTCAAAT CTATGCTTGT GGCGGTGATT GTTCCCAATC CAGAAACCCT AAACCGGTGG GCTAAAGATC TCGGTTTTAC TAAACCACTC GAAGAACTCT GTTCTTTCCC GGAGCTTAAA GAACACATCA TTTCAGAACT GAAGTCCACG GCAGAGAAGA GCAAGCTAAG CAGGTTTGAG TACATAAAAG CTGTGACGGT GGAGACAAAA CCTTTTGATG TAGAGAGAGA CTTGGTGACT GCGACCTTGA AAAATAGGAG GACCAATCTT CTCAAGTATT ATCAGGTATC AATCGACGAA ATGTACCGAA AATTGGCGGC AAAGAGAAGC TGA 
Length1983
Protein Sequence
Protein Residue
Map Locationscaffold_4: 21776847.. 21781111
Download Sequence
A.thaliana
AGI-codeAT2G47240.1
DescriptionAMP-dependent synthetase and ligase family protein
TAIR curator summaryEncodes an acyl-CoA synthetase that acts on long-chain and very-long-chain fatty acids, involved in cuticular wax and cutin biosynthesis
Alias[CER8][LACS1][ECERIFERUM 8][LONG-CHAIN ACYL-COA SYNTHASE 1]
Gene coexpression
MR
MR Locus Description
9.79796 Ahg936209 Protein of unknown function (DUF784)
29.95 Ahg908159
48.2286 Ahg927040
48.4974 Ahg907969
53.9073 Ahg482973 nodulin MtN21 /EamA-like transporter family protein
56.3116 Virus0862
61.0164 Ahg915566 NAD(P)-linked oxidoreductase superfamily protein
68.1909 Ahg341017 ENTH/VHS/GAT family protein
94.1541 Ahg915876
94.3451 Ahg944416 SAUR-like auxin-responsive protein family
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression