Detail


ID : Ahg322753

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|322753|fgenesh1_pm.C_scaffold_5000297
Sequence
ATGGAAGATT CTAGACTTTT TCCGTTCGCC GGAAACTTAG ACCCTCGTGC TCAAGAGTTT ATACCACTTA ACCCTACCTC CTCCGGTTTT TACTTCCCGT TCACTCCTCC TTCACCGCTT CCTCCGCCGT TACATCCGTC GTCGGAGCCA AGAGTTTTCA CATTCTTCAA CATCCCACCA CATCCGGTGA TGTTTTCTCC TCCTCCTTCT CAACCACCAC CATCACCACC ACCGCGTCCG TGTTTTAACG GCGTTTCGGC AGCTCAACGA CTTCCTCCGC CGTCAAATTC TCCGACGCGA TCTCTCTCAT TGATCTCCGT ACCGCGTGAC GTCACCGAGT CTACAGTGAG ACGTGACTTG GAGGTTTACG GCGACGTTCG TGGCGTGCAA ATGGAGAGAA TCTCTGAAGG AATCGTGACC GTCCATTTCT ACGATATCCG TGACGCTAAA AGAGCGGTTC GAGAAGTTTG TGGTAGACAC ATGCAGCAAC AAGCCAGAGG TGGAAGCGTT TGGAGCTCAC CTTCTACTTC ATCGGCGCGT GGGTTTGTTT CCGGTAGACC TGTGTGGGCT CAGTTCGTAG TTCCGGCCAC TAGCGCCGTT CCCGGAGGTT GTAACCAGGG AACGTTAGTT ATATTTAACT TAGACCCTGA AGTCTCTTCC ATTACTCTCA GACAGTTTTT CCAAGTTTAC GGTCCGATCA AAGAGTTGAG AGAGACACCG TACAAGAAAC ATCAAAGGTT CATTGAGTTT TATGATGTAA GAGATGCGGC GAGAGCGTTT GATCGAATGA ATGGTGAAGA GATCGGTGGG AAGCAAGTTG TGATCGAATT TAGTCGACCT GGTGGAATTA AGAACAAGTT CAGGTCATCT AGGCAACCGC AGCTACCGTT TCAACCGCTT CAACAGCCAC CAATTCTATT TCCTCCTTTG AGGCGGCCAG TAACTCTCAT GAAAGATAAA AACAAGAATG TGAGCCCTAA AAATGGAATT ATTGCTGTTG GTGCTTCTAT GCGTTCGTTA TGTATCATTG GTGATGACGA TAATAAGACC CGAGGAACGG AATCCGAATG TGCGGAGACA AAGAGCAAGA ATGTGGCTAA GTGGGGGAAG AAAAGACAGA TGAAGAACAT GGAACTAAGT CAGTTTCTTA TCAGTGAAGA AACCATGGAA GATCCGAGTT GCAGAGATCC ACGTACTACT TTGATGATCA AGAACATACC AAACAAGTAC AGTCAAAAGC TACTCTTGGA TATGCTAGAC AATCATTGCA TTCACATCAA CAAAGCAATC ACCGAGGAGC ACGATGAACA TGAGTCTCAT CATCAGCCGT ATTCTTCTTA TGATTTCGTG TATCTCCCCA TGGATTTCAA CAATAAGTGC AATGTTGGTT ATGGGTTTGT GAACATGACA TCTCCGGAAG CAGCTTGGAG GTTTTACAAG GCGTTTCATC ATCAACGTTG GGAGGTTTTT AATTCGCGTA AGATTTGCCA GATCACATAT GCAAGAGTTC AGGGTTTGGA GGATCTAAAG GAACACTTCA AGAGCTCTAA GTTTCCGTAC GAGGCTGAGC TATACCTGCC AGTGGTCTTC TCGCCTCCAC GAGACGGGAA GAGGTTAACA GAACCTGTCT CCATCAACAT CAACGGCTGC ACCAGACTTA ATCATCTTGA GCGAATGGAC GGTCAAGATC ACTCTCTGAG TAGATCATAT TGTGATAGTG ACCATGATAA TAGTCACGAA GATGGATTTT CCGGCAGTAG TAGCATAGAC TGTGGCCGGT GTATCACATT GGAAGGAGAA ACATCTTTCT AG
Length1812
Protein Sequence
Protein Residue
Map Locationscaffold_5: 2503518.. 2506274
Download Sequence
A.thaliana
AGI-codeAT3G26120.1
Descriptionterminal EAR1-like 1
TAIR curator summarySimilar to terminal ear1 in Zea mays. A member of mei2-like gene family; phylogenetic analysis revealed that TEL1 belongs to the third clade of mei2-like proteins (TEL clade), with conserved two N-terminal RNA recognition motifs (RRM), in addition to the C-terminal RRM, shared among all mei2-like proteins.
Alias[TEL1][terminal EAR1-like 1]
Gene coexpression
MR
MR Locus Description
16 Ahg472435 Galactosyltransferase family protein
27.9106 Ahg318745 Major facilitator superfamily protein
31.496 Ahg482684 non-intrinsic ABC protein 12
32.249 Ahg898532
36 Ahg485821 alpha/beta-Hydrolases superfamily protein
44.0908 Ahg477038 F-box/RNI-like superfamily protein
44.7661 Ahg938128
50.3488 Ahg337343
50.7247 Ahg944624
50.8232 Ahg917268
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression