Detail


ID : Ahg323065

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|323065|fgenesh1_pm.C_scaffold_5000609
Sequence
ATGTCACTTC CATGTTTCAC AACATTGTGT AATATGTTGC AGACAAATTA CGGTCTACAA CCAACACTAA ATATTAGCAT TGAAGAAAGT GTGGCTATGT TTCTACGGAT ATGTGGGCAC AATGAAGTTC AAAGAGATGT TGGTTTAAGA TTTGGCAGAA ATCAAGAAAC TGTGCAGAGA AAATTTAGGG AAGTTCTTAC GGCTACTGAA TTATTGGCAT GTGATTATAT CAGAACTCCA ACAAGACAAG AACTTTATCG AATTCCTGAA AGACTTCAGG TAGATCGGAG ATATTGGCCA TATTTTAGTG GATTCGTTGA AGCTATGGAT GGAACTCATA AGTATTATCT TGTTGATTCT GGTTATCCAA ACAAACAAGA GTTTTTGGCT CCTTATAGAT CATCACGAAA CCGAGTTGTG AGATATCATA TGTCACAATT CTATTCTGGT CCTCCTCCAA GGAATAAACA TGAACTGTTC AACCAATGTC ACGCATCTTT ACGTTCGGTT ATCGAGAGAA CTTTTGGAGT TTGGAAGAAA AAATGGAGGA TTATTTCTGA TTTCCCAAGA TATAATGTTC ACATTCAAAA AAGAGTAGTA ATGGCTACAG TGGGATTACA TAATTTCATC AGAATTTCAA ATTTCTCAGA TGCAGATTTT GCAGATGTAA TGACAGAAAC AAATATAAAC AACGGTGATT TTGAGCATGA TGTATGTGAC ATGGATGCAA CAGAGTTAGC AGATGGAGAA TATATGACGC AAATAAGAGA CAATATTGCA AATATGTTAT GGGGAAATCA AAATAATAGA TAA
Length813
Protein Sequence
Protein Residue
Map Locationscaffold_6: 18210173.. 18211186
Download Sequence
A.thaliana
AGI-codeAT5G28664.1
Descriptiontransposable element gene
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.73205 Virus1285
8.24621 Ahg926025
8.94427 Ahg936476 Plant self-incompatibility protein S1 family
13.2665 Virus1476
13.9642 Ahg951803 Tetratricopeptide repeat (TPR)-like superfamily protein
24.9199 Virus3636
27.2764 Ahg924200 RNI-like superfamily protein
27.4955 Ahg490343 root hair specific 13
28.775 Ahg949059
30.8221 Ahg331355 F-box and associated interaction domains-containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression