Detail



ID : Ahg323380

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|323380|fgenesh1_pm.C_scaffold_5000924
Sequence
ATGGATTACA CAAAAAGCGA AGAAACACCG ATAAACCGTC TTCATTTCCC GGCGACAGAG CTAAACCACT ACGAAGAACA ACAAGGATCA ACAAATTCAT CTGAAAGCAG AAGCAATGAA GAGGTCTCTG ACTGTGATCA GCAACATTCT TCAATAGCTA ACGAGCTCGG GCTAATGGAG TTGCCTAAAG ACGATAAAGC TTACAAGCTA ATCTATGGTC ATTGCCAATC TAAGCTAACT TCTCACTTAG GCAATCAATT TCAGATTGTA TCAATTCTCA AGAACGGATT TAAAACACCA TTAGGACAAG CTAAGCTCAA AGCCTTTCAG ATATACACTG AGTCTGTGGC AAAGAAAAGC GGAAGTTACT GCGAATGCGG TGGAAACAAA GCTGCTGCTG GTGAAGCAGC GAGAGTGAAA TACGGTTGTT GCGGTGTGGA GAAGGAAGAG TTAAAAGCGA TTCTAATGTA TGGATTTAGC CAGTTTAGGA ACAACAATGG CTTATGTCTC TCACCAGACA ATGCTTCTCT TCAATGTATG ATAGATCCTT CATCATCTTG TAACGAAGAC GGGACTAGAT TCTTGTTGTT TTCAAGAATT ATTATGGGAA AATCAGAGGT TATGGGCTCG ACCGCACAAT CGTATCCGAG TTCTCCAGAG TTTGATTCAG GTGTAGACAG TTTAATATCT CCGAAGAAGT ATATGATTTG GAGCACACAC ATGAACACTC ATGTTTTGCC TGAGTTTGTT GTTTGCATCA AAACTCCATC CATCTTGAGA AGTAAGAACC CGAAATCGCC TTGGATTTTG TTTCCAATAC TGATCAAATC GATATCGAAG TTTCTAAACC CGTCGCAAAT CCGTCTCATT CAGAAACACT ATAAAGAATA TCAAGAAAGT AGAATCTTAC GGTTTGAGTT GATTCAACGA CTGAGGACTA TAGCCGGAGA TAGGTTATTG GTTCAAATCA TCAAATCTTT CGGACAAAAG GTACATTGTA TCGTAGACAC ATTTTCAAAA CGTTAA 
Length1026
Protein Sequence
Protein Residue
Map Locationscaffold_5: 12761170.. 12762463
Download Sequence
A.thaliana
AGI-codeAT3G47720.1
Descriptionsimilar to RCD one 4
TAIR curator summaryEncodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation.
Alias[SRO4][similar to RCD one 4]
Gene coexpression
MR
MR Locus Description
7.34847 Ahg913174
7.93725 Ahg349115
10.583 Ahg912766 Zinc finger C-x8-C-x5-C-x3-H type family protein
14 Ahg479724
18.868 Ahg950350
26.8328 Ahg330262
28.2666 Ahg925923 pleiotropic drug resistance 6
29.8329 Ahg923546
29.9333 Ahg919506
34.2053 Ahg330989
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression