Detail



ID : Ahg323545

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|323545|fgenesh1_pm.C_scaffold_5001089
Sequence
ATGGAAACTA GAATCAAACA GAAGAAGAAA ATATCCGAGA TTTTCAAAGA TTTTATGACA GGAATCACAC AGCTTGAGGA ACTAGGGAAT GCTGCAAACA ACTTTCTTCT TCGGTTTCAG CAAGGACTAA GTTTTCTTCA ACGCCCTCCA ATGGTTACTT CGTCTAAGTT GATGGAGAAC ATTATCAAGA AGAATGAAAC TCGACGGCTT AAATCATATA TGGAAGCAGG ATGTATTAAT ATCCATGATG CGGCACAAAG TACAAGAGCT TATGTGAATG TTGCAGCCAA AAGCTTGTTA ATTGAGCTGG AGCATCTCAC TGATGAGGCC GCTCTTGCAA TTGAGTCTGC CACGCAGCTA GATAAAGACT CAAGTAATGA ATTGCGACAA GTTACGTGTG ATGAGGAGAA CGGGACTGCA CAATTACCTC AAGGACCTGA AGTTACAGAG TACGCTGCAC TTATCGCAGT AATTTACAAT ATGATGAAGC AGAACTATGC GATGCAGGAA AAGATTGTGA GATCGCTTAG TTTGAAGTCA TCATCTGGTG AGCTAGAGAG TTACAGTCTG ATGTGGTCAT TGCGTCCCGG CGTCTTCGAA TTTTTCGTGG CTGCGTTTGA CGTTGCCACG AAGAAGACGA AGATGGATTA CCAGAACAAG CATGTCCTTG CTCCCATGGT TCGTGTGGGA ACGCTCTCTT TCAGGATGTT GGCGGCCGAA TACGGCGCCG ATATCACATA CAGTGAAGAG ATTATCGATC ATAAGCTTGT TAAATGCGAA CGTCGAATTA ACGTTGCTTA TGGGACAACT GAGTTTGTGG AGAAAGGAAC AGACAATGTC GTCTTTAGCA CATGTAAAGA AGAGAGAAAT AGAGTTGTTT TTCAAATGGG AACTTCTGAT GCTGTTAGGG CTCTAAAAGC TGCTGAGATT GTGTGCAACG ACGTTGCAAC TGTTGATATT AATATGGGTT GCCCCAAGGC GTTCTCTATC CAAGGAGGAA TGGGTGCTGC TTTGTTAAGT AAACCCGAAC TTATTCATGA TATTTTGGCA ACACTTAAGA GGAACTTAGA CGTACCGGTT ACTTGCAAGA TTCGTTTATT AAAATCACCA GCAGATACTG TTGAATTGGC TAGGAGAATC GAGAAGCTTG GTGTACCAGC TCTTGCTGTA CATGGGAGGA AAATTGCAGA CAGGCCAAGA GATCCTGCTA AATGGGATGA GATTGCAGAT GTGGTGGCAG CATTATCTAT TCCCGTCATT GCAAATGGCG ATGTTTTAGA ATACGATGAT TTTTCTCGCA TTAAAACTGC AACAGGCGCT GCATCAGTGA TGGTTGCAAG AGGAGCTATG TGGAATGCTT CAATTTTCTC TCCAAAAGGA AAATCACACT GGGAAGATGT GAAAAAGAAA TACCTTAGAA AGAGCATCTT GTGGAATAAC GATGTCAAGA GCACGAAATA CACGATAAAG GAGATGATAG CGCATCATTC TTGTCTTGAA CTACCGGAAG GGAAGTCTAT CAACAGAGCA GACACTTTAG AAGATTTAGC GCGGCTTTAC GATTTAGAAG ATTACTTTTG GACAGTGAAG AACATTGGTC CACTGACACA TGACTTAAAT CATGTTTTAT GA 
Length1632
Protein Sequence
Protein Residue
Map Locationscaffold_5: 13879743.. 13883141
Download Sequence
A.thaliana
AGI-codeAT3G49640.1
DescriptionAldolase-type TIM barrel family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
19.5959 Ahg931722 anaphase promoting complex 10
30.3974 Ahg356151 DNA/RNA polymerases superfamily protein
31.305 Ahg490319 DNA mismatch repair protein, putative
32.6803 Ahg940499 leucine-rich repeat transmembrane protein kinase family protein
33.6452 Ahg476250 senescence associated gene 18
39.2683 Ahg898832 Integrin-linked protein kinase family
41.3521 Ahg487973 Protein kinase superfamily protein
46.3897 Ahg483035 Mitochondrial substrate carrier family protein
50.3984 Ahg904690 F-box and associated interaction domains-containing protein
51.4393 Ahg902855 Pentatricopeptide repeat (PPR) superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression