| Annotation |
|---|
| Description | jgi|Araly1|323586|fgenesh1_pm.C_scaffold_5001130 |
| Sequence |
ATGGAGCTTA AACTAGCCAC CGCCGAGAAA CAAGTGCTTG AAGAGTTGGT GAAGCTACTT CAGAGTCGAG ATTTGCGTGG CGAAAATGGA AATTGGAAGG AATTTTTACA TGTTCACGAC AAAAATGCCG AATCACCAAG TGACCCTTCG AGGCGTTCTC ATGAAGATTT GGTTCAGTTT CTGACAACTT TTAAGAAGAA AGAAGATTTG CAAGTTCTGA AATGTCACGC CAATCATCTT CTCCTTGAAA AGCTGAAGCA GGAATCCGAA GATGAAGACA CTCCTGAGCG GAGGCTAGTT CGATTGACCA TTGAGCATCC GAATTATTCA GTAGACTATT CATTCAAGCC ATACTCTGAG GACTGGTTTG TATCCGATGT TGGAATGAAG ATGTCAAAGG TGATGCAATC AACTAACATG GTAGCTGTTG ATTGTGAGAT GGTTCTTTGT GAAGATGGGA CTGAGGGTTT AGTTAGAGTT GGCGCTGTAG ACCGTGATTT AAAGGTGATT CTTGATGAAT TTGTGAAACC GGACAAACAT ATTGTTGACT ATAGGACAGA CATTACAGGG ATTACTGCTG AAGATATCGA AAATGCTACA CTCTCTGTGG CAGATATACA GGAAACGTTG CAGCCCTTTC TTTCTACGGG TACGATTTTG GTAGGTCACA GTTTGAACAG AGATTTGGAA GTGTTGAAGA TAGATCATCC CAAAGTAATC GACACTGCAC TTGTATTCAG GTATTCCAAT ACACGAAAGC TTAGAAGACC TTCACTTAAC AACCTTTGCA AGTCTATTTT GGGTTACGAA GTCCGAAAGA CCGGCGTTCC TCATGATTGT GTACACGACG CAGAAGCTGC GATGAAACTT GCACTTGCTG TTGTAGAGAA AAGAGTTGAC ACAACAATCA AACCATCTAA AGAGATGTTG GAGGTTGAGA AAGCAAAACT CTTTCTACAT AAAATCCCTA ACAATGTGCC ATCTGAAGAG CTGGACCAAG TTCTCTCTGG AAAGTTTACA CTTGATGTGA AGCAAGCGAA AACACAGGGA CGGTACTATT GTGCATTTGT TGTTTTTGGT AGTTCAGAAG ACGCAGATCA AGCATTTGAA AACGTGGATG GAATTCAAAT GACGGATTCA TTAGGCTTGC TACAAAAAGT GGTCATCGTT AAGCTGAGAT CGGGATCAAG AGCTAGTATA TATGTCCGTA AAATGGTTCA AGATGAATGA |
| Length | 1230 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 14129611.. 14131825 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G50100.1 |
| Description | small RNA degrading nuclease 1 |
| TAIR curator summary | Encodes an exonuclease that degrades single-stranded small RNAs in vitro and limits the accumulation of small RNAs in vivo. |
| Alias | [SDN1][small RNA degrading nuclease 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 5.56776 |
Ahg474126 | Xanthine/uracil permease family protein |
| 31.6386 |
Ahg488242 | non-intrinsic ABC protein 14 |
| 40.1746 |
Ahg493595 | Protein precursor Ycf15, putative, chloroplast |
| 40.1746 |
Ahg473737 | Protein precursor Ycf15, putative, chloroplast |
| 48.7442 |
Ahg324496 | Phosphoglycerate mutase family protein |
| 53.479 |
Ahg337384 | Regulator of Vps4 activity in the MVB pathway protein |
| 63.6239 |
Ahg932001 | |
| 63.7887 |
Ahg473236 | Protein of unknown function (DUF295) |
| 67.8086 |
Ahg927505 | Ubiquitin-like superfamily protein |
| 73.6478 |
Ahg950033 | SPFH/Band 7/PHB domain-containing membrane-associated protein family |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|