Detail



ID : Ahg323719

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|323719|fgenesh1_pm.C_scaffold_5001263
Sequence
ATGTCGGCCC AAGTGATCTC TGAGCAGACC TTTCACTCCA TCCACGACAC CAGGATGGAG GAGACGAATA CAACTTTATA TCATAAGAGG TTGGAAGGAA AAGTAGCCAT TATCACCGGA GGCGCACATG GAATAGGCAA AGCAACTGTC ATGCTATTCG CTAGACACGG TGCCACGGTG GTGATTGCTG ACGTGGACAA TGTAGCTGGC TCTTCCCTGG CTAAGTCACT TTCATCCCAC TTAACCGCCT TCACGGTGAC ATTCATTAGC TGCGATGTCT CAGTCGAAAG CGACGTGGAA AACCTCGTGA ACGCAACGGT CGCGCGCTAC GGTAGGCTTG ACATTCTATT CAACAACGCA GGAGTTCTCG GAGACCAGAA GAAACACAAA AGTATATTAG ACTTCGACGC GGACGAGTTC GACCGCGTGA TGCGTGTGAA CGTGCGTGGC ATAGGACTCG GCATGAAACA CGCGGCACGT GCCATGATCA AGAGAGGGTT CAAAGGTTGC ATAATCTCCA CGGCGAGTGT AGCCGGTGTG ATGGGTGGAA TGGGACCACA CGCTTACACG GCCTCGAAAC ATGCGATCGT TGGTTTGACC AAGAACGCAG CGTGTGAGCT AGGCAAGTAT GGGATTAGGG TTAACTGTAT ATCACCGTTT GGTGTTGCCA CGTCAATGCT GGTTAATGCG TGGCGAAAGA CGAGTGGTGG TGACGTGGAA GATGATGAAG TGGAGGAGAT GGAAGAGTTT GTGAGGAGTT TGGCTAATTT GAAAGGAGAG TCTTTGAGAG CGAATGATAT AGCTGAAGCA GCGTTATATT TGGCAAGTGA TGAGTCTAAA TATGTGAACG GACATAATCT TGTCGTTGAC GGTGGTGTTA CGACTGCAAG AAACTGTGTT GGCTTATGA 
Length909
Protein Sequence
Protein Residue
Map Locationscaffold_5: 14865140.. 14866176
Download Sequence
A.thaliana
AGI-codeAT3G51680.1
DescriptionNAD(P)-binding Rossmann-fold superfamily protein
TAIR curator summary
Alias[AtSDR2][SDR2][short-chain dehydrogenase/reductase 2]
Gene coexpression
MR
MR Locus Description
5.74456 Ahg923015
17.1464 Ahg935204
18.5203 Ahg937109
25.6125 Ahg891870
27.7128 Ahg476276 Integrase-type DNA-binding superfamily protein
32.187 Ahg335836 EF hand calcium-binding protein family
41.5933 Ahg921240 F-box family protein
45.4753 Ahg945635 isopentenyltransferase 4
52.192 Ahg327864 Dehydrin family protein
54.4702 Ahg491137 O-methyltransferase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression