Detail



ID : Ahg324207

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|324207|fgenesh1_pm.C_scaffold_5001751
Sequence
ATGTGTGCAT TAGTACCTCC ATTGTTCCCA AACTTTGGGT GGCCATCAAC GGGAGAGTAC GACAGCTACT ACCTAGCCGG AGATATCCTC AACAACGGCG CGTTTCTTGA TTTTCCGGTA CCGGAGGAGA CTTATGGAGC TGTTACAGCG GTGACTCATC ATCAGAGCTT TGGGGTTTCT GCTTCGTCGG AAGGAAATGA AATAGACAAC AATCCGGTGG TCGTCAAGAA GCTTAATCAC AATGCTAGTG AGCGTGACCG TCGCAAGAAA ATTAACTCTT TGTTCTCATC TCTCCGTTCA TGTCTTCCTG CCTCCGACCA ATCGAAGAAG CTAAGCATTC CTGCGACAGT TTCTCGAAGC TTGAAGTACA TACCAGAGCT GCAAGAGCAA GTGAAGAAGC TAATAAAAAA GAAGGAAGAA CTCTTGGTGC AAGTGTCAGG TCAAAGAAAC ATTGAACATT ACGTTAAGCC GCAACCAAAG GCGGTGGCGA GTTACATCTC GACCGTGTCT GCGACTAGGC TTGGAGACAA CGAAGTGATG GTCCAAATCT CATCGTCTAA GATTCATAAC TTTTCGATAT CTAATGTTTT AAGTGGGTTA GAAGAAGATG GGTTTGTTCT TGTGGATATT TCATCTTCAA GGTCTCAAGG AGAAAGGCTT TTCTACACTT TCCATCTACA AATGGACAAG ATTGAAAATT ACAAGCTGAA TTGCGAAGAG TTAAGTCAGA GGATGTTGTA CTTGTATGAG GAATGTGGAA ACTCATTTAG ATTATAA 
Length777
Protein Sequence
Protein Residue
Map Locationscaffold_5: 17188824.. 17189712
Download Sequence
A.thaliana
AGI-codeAT3G56980.1
Descriptionbasic helix-loop-helix (bHLH) DNA-binding superfamily protein
TAIR curator summaryEncodes a member of the basic helix-loop-helix transcription factor protein.
Alias[BHLH039][bHLH39][ORG3][basic helix-loop-helix 39][OBP3-RESPONSIVE GENE 3]
Gene coexpression
MR
MR Locus Description
1.41421 Ahg902084 basic helix-loop-helix protein 100
2.44949 Ahg471352 Protein of unknown function (DUF506)
2.82843 Ahg923039
2.82843 Ahg923041
3.74166 Ahg923037
4.47214 Ahg900858
5.19615 Ahg892333 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
5.65685 Ahg895424
9.53939 Ahg923038
11.8322 Ahg936309
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression