Detail



ID : Ahg324667

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|324667|fgenesh1_pm.C_scaffold_5002211
Sequence
ATGGAGAGCA CTAGATCGGA CCCAGAGCTT GATGATGACT TTAGTGAAAT CTACAAGGAG TATACTGGTC CTGCAAGTAC TGTGACCAAC AACACTATCC AAGACAAAGA CAAACCTATC AAACAACGTT CTGAAGAAAG ATGTGATGAA GAAGAGCAAC TACCTGACCC CAATTCTGTA CCAACTGATT TCACTAGCCG AGAAGCTAAG GTTTGGGAGG CTAAATCCAA AGCTACTGAG AGGAATTGGA AGAAGAGAAA AGAAGAAGAA ATGATCTGTA AAATATGTGG CGAGTCTGGT CATTTTACTC AGGGATGTCC ATCTACACTT GGTGCCAACA GGAAGTCTCA AGAATTCTTT GAAAGGGTAC CAGCTAGGGA CAATAATGTG AGAGTTTTGT TTACTGAGCA AGTTATAGAA AGTATTGAAA GGGAGACCGG CTGCAAGATT AAAATGGATG AGAAGTTCAT AATTGTTAGT GGCAAGGACA GATTAATCTT GAGGAAAGGT GTTGATGCTG TTCACAAGGT TAAGGAGGAT GGTGAGATGA AAAGTTCTTC TGTTTCCCAC AGGAGCAGAT CGAGGTCACC TAGGCGAACT TCTGTTGGTC CACCACGTGC TCGAAACTCT GAACCTCAAA GGCAGCACCC TCCATCACAT GGTTCATCAA GTTTCCCAGA GCGCTCTGGA AGGCAAGATA AGTTTGTGGA TAATCGTGTG CGCGAAGAGA ATCGTATACG TGAGAATCAG CGAAATGTTT CCCGAGGATC ACCACAAGCT TATGGTAGTG ACAGAGCTCG GAGTCGTTCC ACACATTCGA AATCTCCAGG GAGACCACGT TATAGTGGAT GGGATAAACC GTATGATAGG CAAAAGTCTG AGGTGAGTGG TTATAGGTCT GAAAGATGGG ATCAGGAGAG AATGGGTGGC TCCAGCGATA TTCAGGTGAG ACATCAGTTT GAACGCCCTC CTTTCCCACA GACTTTAGAA GAACTAGAAT TGGAATATAC GAGGGATGCA ATGGAGCTTG AAAAAAAGTG CGATAAAGAA GAAGATGAGG AGAAAATTAA GCATCGTGAG ACAATCCGGG AACTGAGAGA GAGTTACATG AAGAAACTGG CTGGGCTAAG GGGTATGAAT GCTAAACAAT GGGATGAATT CCTTCAACTG GATGCTCAGA GACGTCAACA GCAAGCACGG CAGCAAAACT CTGGCCTGAA TTATGGTAAC TATAGACAGT TTCCTCCTTA TGCTGAGTTT GATGATGGCT ACTCTTCAAA TCCTCCTCCC TATGGTGGAA ACAATGTGCC AATGGATTCC AAGAGAAGAT ATCCAAATCA TGGAGATAAC TATTCTTCAA GGCATCAAGA CAACAATTAT GGTGGGTTCC AACGCCAGAG ACGTGAGGAC TATGGAAAAG CCTACAATCG TTATTAG 
Length1437
Protein Sequence
Protein Residue
Map Locationscaffold_2: 9876613.. 9878705
Download Sequence
A.thaliana
AGI-codeAT3G62330.1
DescriptionZinc knuckle (CCHC-type) family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1 Ahg908068 Zinc knuckle (CCHC-type) family protein
48.3735 Ahg888927 MIR156C; miRNA
66.2118 Ahg916105 endoplasmic reticulum retention defective 2B
67.9706 Virus3605
76.9415 Ahg346476 P-loop containing nucleoside triphosphate hydrolases superfamily protein
77.2205 Ahg316768 gamma-glutamyl hydrolase 2
99.3277 Ahg336483 NAC domain containing protein 17
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression