Detail



ID : Ahg325380

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|325380|fgenesh1_pm.C_scaffold_6000600
Sequence
ATGTCTTATA ATACGGGGAA GAAGGAGAGT AGTCCAGTTT CGCCATTGAA GAAGCGACGA GCGAGCTGGT CGGAACTTTG GGTTAACCAT CACCAGTTAT TGTCTTCTTC GCCGCTTGAT TTTGCCGCAA AGTTTCAGTC TTTGACTCCT CCAATCTCCA AATCCAAAAC CCTACTTCCT GATTTCACGC TTCTCTTACC TGACCTCATT CTCATCAGAG TCATTGAGAA AATCCCTAAA TCTCAACGGA AAAATCTCTC TTTGGTTTGT AAGAGATGGT TTAAACTCCA TGGTCGTCTT GTACGGTCTT TTAAGGTTTC GGATTGGGAA TTTCTAGCGT CTGGTCGGCT GATTTCGAGG TTTCCCAATC TGGACACTGT TGATTTGGTC AGTGGGTGTT TAATTTCGCC GCCAAATTCA GGTATTTTAG TTAACCACAG GATAGTTTCG TTTACTGTTG GTGTAGGGTC TTATCAGAGT TGGAGTTTCT TTGAGGAGAA TTTGTTGTCT GTTGATATAG TTGAGAGAGG GCTTAAAGCT CTTGCTGGTG GTTGCTCTAA TCTCCGGAAA CTCGTAGTGA CCAATACTAG TGAATTAGGG TTGTTGAATG TAGCTGAAGA GTGTTCCAGG TTGCAAGAAC TCGAATTGCA CAAGTGTTCT GATAGTGTTT TGCTTGGCAT TGGTGCGTTT GAGAATCTGC AGATCTTGAG ATTGGTTGGG AATGTCGATG GTTTGTATAA CTCTTTGGTT TCGGATATCG GATTGATGAT TTTGGCTCAA GGGTGCAAGA GACTGGTAAA GCTTGAACTC GTTGGATGCG AGGGAGGATT TGACGGGATT AAAGAGATAG GTGAGTGTTG TCAAATGCTT GAGGAACTCA CTCTTTGCGA TCATAAGATG GAGTCGGGTT GGCTTGGAGG TCTTCGATAT TGTGAGAATC TCAAGACGCT GAAACTCGTG TCTTGTAAAA AGATCGATAA TGATCCAGAT GAGTGCTTGA GTTGTTGTTG TTGTCCTGCT CTCGAGCGAT TACACTTGGA GAAGTGTCAA TTAAGAGATA AGAATACCTT AAAGGCTTTG TTTAAGATGT GTGAAGCAGC GAGAGAGATT GTTTTCCAAG ATTGTTGGGG ATTGGATAAT GATATATTCA GCTTGGCATT GGCTTGCGGG AGAGTGAAGC TTCTGTATCT AGAAGGATGC TCATTGCTAA CAACATCATG TCTAGAATCC GTGATTCTAC ATTGGCACGA GCTCGAACAT CTGAAAGTGG TTTCATGCAA GAACATAAAA GATTCGGAAG TCTCTCCGTC GCTGTCTGCT CTGTTCTCAG CTTTAGTAGA ATTGCAGTGG AGACCAGACA CCAGATCCCA TCTCTCTTCA AGCCTTACAG GGACCGGAAT TGGGGGGAAA GGCGGAAAGT TTTTCAAGAA AACATGA 
Length1437
Protein Sequence
Protein Residue
Map Locationscaffold_6: 2865697.. 2867355
Download Sequence
A.thaliana
AGI-codeAT5G07670.1
DescriptionRNI-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.79583 Ahg359035 RING/U-box superfamily protein
9.8995 Ahg336003 nudix hydrolase homolog 15
11.6189 Ahg479517
12.1244 Ahg483819 Pyridoxamine 5'-phosphate oxidase family protein
22 Ahg473178 receptor-like kinase in flowers 1
33.7639 Ahg940838 sigma factor 4
41.3521 Ahg947584 homolog of Xeroderma pigmentosum complementation group B 2
48.1248 Ahg481833 pumilio 3
53.8516 Ahg474131 F-box family protein
57.0088 Ahg492153 FKBP-like peptidyl-prolyl cis-trans isomerase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression