Detail



ID : Ahg325643

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|325643|fgenesh1_pm.C_scaffold_6000863
Sequence
ATGGGTTTTC TCTTTGGTTT GTTCATAGGA ATCGCAGTTT CTTTCGGTTT GGTAGTCGCA TTTGCACGCT ATTCTAATGT CAGATCCACT CGTCGAGCTG ATTTGGCAAA GACCATTGCT GCATTTGCAA GAATGACTGT TCAAGATTCG AGAAAACTTC TCCCTGGAGA TTTTTATCCT TCCTGGATTG TGTTTTCTCA GAGACAAAAG TTGAGTTATA TTCTAAGTCT CTTTCACTTC CATCATTTTT TAAATTGGCT TAATCTTGAA CTTGAAAAGA TCTGGCCTTA TGTAAATGAG GCAGCTTCTG AGCTGATTAA AAGCAGTGTG GAGCCAGTAC TTGAACAGTA TACACCACCT ATGTTAGCAT CTCTTAAGTT CTCTAAGTTT ACTCTTGGGA CTGTGGCTCC TCAGTTCACA GGAGTTTCTA TCTTAGAAAG TGAAAGTGGA TCTAATGGAA TTACAATGGA ACTTGAAATG CAATGGGACG GTAATCCAAA AATCGTGTTG GATATCAAAA CCTTACTTGG CGTGGCTTTA CCGATTGAGG TGAAAAATAT AGGATTCACA GGTGTTTTCA GGTTGATATT TAAACCTCTT ATTGATGAAT TCCCTTGCTT TGGGGCACTT TCTTATTCAC TGCGCGAGAA GAAAGGGCTT GATTTCACAC TTAAAGTTAT AGGTGGTGAA TTGACATCAA TTCCAGGGAT TTCAGATGCA ATCGAAGAAA CTATTCGTGA CGCAATAGAA GACAGTATAA CATGGCCTGT TAGGAAAATC ATACCTATAT TACCAGGAGA TTACAGTGAT CTGGAGTTGA AACCTGTTGG AAAATTAGAT GTGAAGCTTG TGCAAGCAAA GGACTTAGCT AACAAAGACA TGATTGGAAA ATCTGATCCT TACGCTGTTG TATTCATTCG CCCTTTGCGT GACAAAACCA AAAGGACCAA AACTATTAGT AACTCGTTGA ATCCGATTTG GAATGAACAT TTTGAGTTCA TTGTGGAAGA TGTCTCAACT CAACATTTGA CAGTAAGAGT GTTTGACGAC GAAGGAGTTG GATCTTCTCA GCTTATTGGG GCTGCGCAAG TACCGTTAAA TGAACTCGTG CCCGGGAAAG TTAAAGATAT TTGGTTGAAG CTAGTCAAGG ATTTAGAGAT CCAAAGGGAT ACAAAAAATC GGGGTCAGTT GGAGCTCCTA TATTGTCCTT TAGGCAAAGA AGGCGGATTG AAGAACCCGT TTAACCCGGA CTACTCATTG ACCATTTTAG AGAAGGTACT TAAGCCGGAA AGCGAGGATT CCGATGCTAC GGATGTGAAA AAACCGGCGA CCTCGAAGAA AAAAGATGTG ATAGTGAGAG GAGTGTTGTC TGTGACAGTG GTGGCTGCTG AAGACTTACC AGCTGTAGAT TTAATGGGAA AGGCAGATGC ATTTGTGGTA ATCACATTGA AGAAATCGGA ATCGAAATCC AAGACAAGGG TAGTACCGGA TAGCTTGAAT CCGATTTGGA ACCAAACGTT TGATTTTGTA GTGGAAGATG CTTTGCATGA TCTATTGATG CTAGAAGTAT GGGACCATGA CAAATTTGGT AAAGATAAGA TAGGGAGAGT GATAATGACA TTGACACGAG TGATGTTGGA AGGAGAGTTT CAAGAGTGGT TTGAGTTAGA TGGAGCTAAA TCAGGGAAGC TTTGTGTCCA TCTCAAATGG ACTCCTAGGC TTAAGCTCAG AGACGCTTCT TGA 
Length1743
Protein Sequence
Protein Residue
A.thaliana
AGI-codeAT5G11100.1
DescriptionCalcium-dependent lipid-binding (CaLB domain) family protein
TAIR curator summary
Alias[ATSYTD][NTMC2T2.2][NTMC2TYPE2.2][SYT4][SYTD][synaptotagmin 4]
Gene coexpression
MR
MR Locus Description
21.3073 Ahg938128
64.8383 Ahg892274 SGNH hydrolase-type esterase superfamily protein
64.8537 Ahg941608 Glycosyl hydrolase superfamily protein
82.3104 Ahg355644 NAC domain containing protein 63
85.4634 Ahg346044 TRAF-like family protein
94.4458 Ahg495065 ethylene response factor 110
95.8645 Ahg912924
97.355 Ahg919507 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression