Detail



ID : Ahg326092

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|326092|fgenesh1_pm.C_scaffold_6001312
Sequence
ATGAGAGATA GAATGGAGAG ACTTGTGGTG CTTCCTTTCT CCGTCGGATG TATCTCCGAC TCAAGTGTTG CCGTTTTATC TCCTCTCTCA AAGCCTCATC ATCATCACTC TCGTCAAGAG ATTCGTGATC AAGAGGAGGA AGATAACATG AAGAATGTAT TCAAGTTCCT TGCGGTTTCT AAGCCCGAGA TTTCTACCGG TATTAACCGG CTTTTCAAGA GCTTCAAGAC CATTTCTCAA CTCTTTGCTG ACAAAGAAGA AGAGAAGGAA GAAGTCGAGA CATCAGGAAT GGAGATAGGA GTTCCCACAA ACGTAAAACA TGTATCGCAC ATCGGATGGG AAAGCGGTTT AACCGCGGCT ACAGGTCCAG GTAAAGGATG GGAAGATCTC ATACCACCGG AGTTGCTTGC AGCCGCTTCT ACAAAAAAAG ATGTTAATCC TCATCTTCAC CCAACTTTAT AA 
Length462
Protein Sequence
Protein Residue
Map Locationscaffold_6: 6420919.. 6421672
Download Sequence
A.thaliana
AGI-codeAT5G16490.1
DescriptionROP-interactive CRIB motif-containing protein 4
TAIR curator summaryencodes a member of a novel protein family that contains contain a CRIB (for Cdc42/Rac-interactive binding) motif required for their specific interaction with GTP-bound Rop1 (plant-specific Rho GTPase). It interacts with Rop1 and is involved in pollen tube growth and function, and exocytosis in the pollen tube tip. Protein most similar to RIC2 (family subgroup V). Gene is expressed in all tissues examined.Interacts with ROP2 during pavement cell morphogenesis and with ROP1 to promote apical F-actin assembly.
Alias[RIC4][ROP-interactive CRIB motif-containing protein 4]
Gene coexpression
MR
MR Locus Description
28.8791 Ahg943784
64.4515 Ahg914329
70.9225 Ahg474421 RING/U-box superfamily protein
72.1942 Ahg472486 O-fucosyltransferase family protein
78.2304 Ahg493441
91.1921 Ahg479724
91.5969 Ahg897957
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression