Detail



ID : Ahg326244

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|326244|fgenesh1_pm.C_scaffold_6001464
Sequence
ATGAGTGCGG TAAAATCGGC GTTAGGTGAT ATGGTGATAA CCTTTTTGTG GGTTATTCTC TCGGCGACGT TTGGGATTCA GACGGCGGCG ATTGTTTCCG CAGTCGGGTT TCATGGCATC ACTTGGGCTC CTCTGGTGAT CTCAACGTTG GTTGTTTTTG TCTCCATATC GATTTTTACG GTTATTGGAA ACGTTCTTGG TGGTGCTAGC TTCAATCCTT GTGGAAACGC AGCGTTTTAT ACCGCCGGAG TTTCCAGAGA TTCTCTATTC TCCTTGGCGA TTAGATCTCC TGCTCAGGCT GTTGGTGCGG CAGGCGGTGC GATAACGATC ATGGAGATGA TACCGGAAAA GTATAAGACG AAGATTGGAG GAAAGCCTTC ATTGCAAGTT GGTGCACACA ATGGAGCTAT TGCTGAAGTG ATCCTAAGTT TTAGTGTTAC ATTTTTGGTG TTACTAATTA TCCTAAGAGG TCCTCGAAAA CTGCTAGCTA AAACGTTCTT GCTCGCTCTC GCTACCGTAT CAGTGTTTGT CGTAGGATCT AAATTCACTA GACCATTCAT GAATCCTGCC ATTGCATTTG GGTGGGCATA TATATACAAG TCTCACAACA CATGGGACCA TTTCTATGTG TATTGGATCA GCTCCTACAC CGGAGCTATT TTATCTGCGA TGCTCTTTCG AATTCTATTT CCGGCTCCAC CTCTGGTTCA GAAAAAACAG AAGAAAGCTT GA 
Length732
Protein Sequence
Protein Residue
Map Locationscaffold_6: 7252633.. 7253958
Download Sequence
A.thaliana
AGI-codeAT5G18290.1
DescriptionAquaporin-like superfamily protein
TAIR curator summaryBelongs to a family of plant aquaporins.Similar to yeast and radish aquaporins. Located on ER
Alias[SIP1;2][SIP1B][SMALL AND BASIC INTRINSIC PROTEIN 1B]
Gene coexpression
MR
MR Locus Description
8.12404 Ahg935381 beta glucosidase 28
10.7703 Ahg950538 myb-like HTH transcriptional regulator family protein
14.0712 Ahg485314 response to low sulfur 1
25.9808 Ahg489834 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
26.8328 Ahg942209 ChaC-like family protein
26.9258 Ahg928972 sulfate transporter 4;2
37.3095 Ahg945948 APS reductase 3
46.8188 Ahg473345 thioredoxin O2
57.7495 Ahg494948 Tetratricopeptide repeat (TPR)-like superfamily protein
58.5491 Ahg356828 cold regulated gene 27
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression