| Annotation |
|---|
| Description | jgi|Araly1|326748|fgenesh1_pm.C_scaffold_6001968 |
| Sequence |
ATGAAAGAAG ACATGGAAGT ATTATCGCTC GCTTCACTAC CGGTAGGGTT CAGATTCAGT CCAACAGACG AAGAGTTAGT CCGTTACTAT CTCCGACTCA AGATCAACGG TCACGATGAC GACGTTAGAG TAATCCGTGA GATCGATATC TGCAAATGGG AGCCTTGGGA TTTACCTGAT TTTTCTGTGG TGAAGACAAT AGACGCAGAG TGGCTCTTCT TTTGTCCATT AGACCGCAAG TATCCGAGTG GAAGTAGGAT GAATCGAGCT ACTGTGGCTG GTTACTGGAA GGCGACGGGA AAAGATCGTA AGATCAAATC AGGAAAGACT AAGATTATAG GTGTTAAGAG GACTCTAGTC TTCTATACAG GTCGTGCTCC TAAAGGGACA CGAACTTGTT GGATTATGCA TGAGTACCGC ACTACTGAGA AGGATCTTGA TGGAACAAAG TCTGGCCAGA ATCCTTTTGT TGTTTGTAAG TTGTTTAAGA AGCAAGACAT TGTGAATGGA GCTGCGGCAG AGGAGTTGAA GTCATGTGAA GTTGAACCAG CGGTCTCGTC TCCAACTGTT GTGGATGAGA TGAAATCTGA GGTTGAAATG TCTGAGGTAT CTCCGGTTTT AGAAGACACA AGGCCTTGTG ACGTCGCTGA ATCTTCTCTT GTAGTCTCCA GCGGATGTCG TAGCGAAAAC TCTGCCCCTG AGGTTACAAC CACCGGGCTT GACGATATCG ATTGGCTCTC ATTTATGGAG TTTGATTCCG TGAATCAGAA TCTGTTCTCT CCGTTGCCTT CTCAGGTGCA ATCTGAGCTT TGTTCCTCTT TCAATGGTTT TCAATCTGGA ACAAGCCAAC TGTTCAATGA GGATCACATT CAGACTCAGT ATGGTACAAA TGATGCCGAT GAATATATGT CCAAGTTCTT GGATTCTCTT CTTGAGATAC CCTATGAGCT TCCAGGGAGG AAAGAGTTCG TGCAACAGAC GCCAGAACAC ATCACATACG AGCCACAGAA TCTTAGCACA TGCAACAAGA TCAATGATGT AACTGAGACA GGAATTAAGA TTAGAGCTCG ACGAGCACAA GCCCCGGGTT GTGCTGAGCA GTTTGTAATG CAAGGTGATG CCTCAAGAAG GTTGCGTCTT CAGGTTAACC TTAACACCCA CAAGTCAGAA ACCGACAGTA CACAACTCCA ATGTATCAAA AAAGATGTTA AGGACACAAC AACGGAAACT ATAGCGAAAG GATGTGGAAA TTTCACCAGA TCAAAAAGCA GGACTAGTTT CATATTCAAG AAAATTGCAG CTATGGGATG TTCATACAGA GGGTTTTTTA GAGCAGGCGT GGTAGCGGCT GTGTTTGTGA TGTCGGTTTG CAGTCTGGTC GCATAA |
| Length | 1386 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 10177877.. 10179860 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G24590.2 |
| Description | TCV-interacting protein |
| TAIR curator summary | Member of NAc protein family. Interacts with turnip crinkle virus (TCV) capsid protein. Transcription factor involved in regulating the defense response of Arabidopsis to TCV. |
| Alias | [ANAC091][TIP][Arabidopsis NAC domain containing protein 91][TCV-interacting protein] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4.79583 |
Ahg481014 | RING/U-box superfamily protein |
| 11.8322 |
Ahg920747 | Calcium-binding EF-hand family protein |
| 21.3307 |
Ahg476830 | DNAJ heat shock N-terminal domain-containing protein |
| 29.8998 |
Ahg950444 | Xyloglucan endotransglucosylase/hydrolase family protein |
| 33.3467 |
Ahg472692 | Actin cross-linking protein |
| 38.4968 |
Ahg476579 | Protein of unknown function (DUF793) |
| 38.7943 |
Ahg935227 | Calcium-binding EF-hand family protein |
| 40.1248 |
Ahg900537 | Disease resistance protein (TIR-NBS-LRR class) family |
| 42.4617 |
Ahg470988 | soybean gene regulated by cold-2 |
| 43.7493 |
Ahg476823 | calmodulin-like 38 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|