Detail



ID : Ahg327304

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|327304|fgenesh1_pm.C_scaffold_6002524
Sequence
ATGTCGTCAT CATCACCGAC GACGAACACA ACAACAGAAT CAGATTCATC ATCTCTACCT ACTCACATCG GCAGATCAAA TTCCGACGGA ATCATCGACA CTACACCATT TCTTCCTCCC ATCGTTACAA GAACCATAAG CGTAGATGAA GAATCCAATC CGATTCATCG ATCCGCTAGA CGACAAGGTC TAAGAGAAGC AGCGAGGTTC CTCCGTCACG CTGGTAGCCG GAGGATGATG CGTGAACCAT CGATGCTCGT TAGAGAAACC GCTGCTGAGC AATTGGAAGA GAGACAAAGT GATTGGGCGT ATTCTAAACC TGTGGTGTTT CTTGACATTT TGTGGAATCT AGCTTTTGTT GCGATCGGTG TTGCTGTTTT GATTCTTAGC CGTGACGAGA AGCCTAATAT GCCGCTGAGA GTTTGGGTTG TTGGTTATGG GATTCAGTGT TGGTTACATA TGGCTTGTGT TTGTGTTGAG TATAGGCGGA GGAGACGACG ACGTCACCGA TCTTCGTCGG AGGATGGTGG TGGTCCTGGG TTTACGAATT CGTCGCAGCA GCAATATGTT TCGTTAGCGC AATTGGAGGA CAGAGGAGAG ACTAGTAATC CCGCGAAGCA TCTAGAATCA GCCAATACGA TGTTCTCATT CATCTGGTGG ATAATTGGAT TCTATTGGGT ATCTGCAGGA GGCCAAACAC TATCTGGTGA CTCTCCTCAG CTCTATTGGC TGTGTATCAT TTTTCTCGGT TTCGATGTTT TCTTTGTTGT TTTCTGTGTT GCACTGGCTT GTGTTATCGG CCTTGCTGTT TGCTGTTGTC TTCCATGTAT AATTGCAATA CTATATGCTG TTGCCGACCA GGAGGGAGCA TCGAAGAACG ACATAGATCA AATGCCGAAA TTCAAATTTA CAAAAACTGG CAATGATGAA AAGCTCTCTG GCAAAGCACG GGGAATAATG ACAGAATGTG GAACAGATTC ACCTATTGAA CGCTCACTTT CTCCCGAAGA CGCGGTACAC TCACATTTCC ACATTCTTAT GCAGTTGTAC ATTTTCAAAG TGTGTAGATT GATAAACTCA TGGCTTCTTA TGATTCTGAA GGAATGCTGC ATTTGTCTCT GTGAATATGA AGATGGAGTC GAACTAAGAG AACTCCCTTG TAACCATCAC TTTCATTGCG CTTGCATCGA TAAATGGCTT CACATAAACT CTCGATGCCC ACTTTGCAAG TTTAACATCC TGAAGAACGC AAACGAAGTC TAG 
Length1263
Protein Sequence
Protein Residue
Map Locationscaffold_6: 20170579.. 20172463
Download Sequence
A.thaliana
AGI-codeAT4G11680.1
DescriptionZinc finger, C3HC4 type (RING finger) family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
11.2694 Ahg488188 IKI3 family protein
11.6619 Ahg928388 GPI transamidase component PIG-S-related
12.3288 Ahg496478 SGNH hydrolase-type esterase superfamily protein
20.7846 Ahg484158 NAD(P)-binding Rossmann-fold superfamily protein
22.8473 Ahg928417 RAB GTPase homolog A5B
26.4953 Ahg495386 DNAJ heat shock N-terminal domain-containing protein
28.7228 Ahg491192
30.8869 Ahg479519 SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related
36 Ahg495375 Tetratricopeptide repeat (TPR)-like superfamily protein
37.0135 Ahg481930 catalytics;transferases;[acyl-carrier-protein] S-malonyltransferases;binding
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression