Detail


ID : Ahg327310

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|327310|fgenesh1_pm.C_scaffold_6002530
Sequence
ATGGCGAATT CACCAGTTAA TAATATACCA TACATTCCCG ATGATTTACT TTTGAACTGC TTAGCCCGCG TATCGAGATT GTACTACCCG ATTCTCTCCT TAGTTTCCAA GAGATTCCGC TCTCTCGTGT CATCTCTTGA GCTTTATGAG ATCCGAATGC TCTTAGGACA CACCGAGAAT TGTCTTTATC TGAGCTTACG TTTAAGTTAT GAATCTGATA CACGTTGGCT CACTCTATGC CGAAGGCCAA CTCGAATCCC TAACCCTAAC CCTAACCCTA ACTTTAACTC ACGATGGTTC TCTTCTTGCT TTAGACCAGA TAGAATCCTA AAGAATCATA CTATGAAGAA AGAGAAGAAG TCAAGTGACA ATCTCATGGT CTCATTCCAA ATTCCCAGTC TTAGTTCTCC ATCGTCTGAG TTGACTGGTA TCGCAATTGG TTCTAATATC TATATGATGA GCATATTCAG CAACGGTGTG TTCTCATCTA GGTTCTTCTT CATGGACTGT CGGTCTCACA CATTGCATGA AGCTCCAAGC ATGCATAGGG CCCCAAAGAA ACCCTCCGTT AATGTTCTTG ATGGGAAAAT ATATGTAATC GAAGGCTGCA AAAATCCCGA TTACTCGAAT TTGATCGAGT GTTTCGATCA AAAAACCTTA ACATGGGAGC ATGTGCCAAG CCCTAGCTCG GCGATACGTG GTAGGTATAT TACAGCAAGT TTAGTTTTCG ACGGAAAGCT TTACCTGTTT GGGGATAAAA AATTGGTTTA CAAGCCCAAC GAAAATAAAT GGGATGTGGT AGGATTGGAG ATGCCTTTGC GTTGGACTCC CTCTTATATA TCTTGCGTAG TAGATAACGT AATCTACTGT TTTGGAGCAT CTAGATTGCT CTTGTGGTAC AACACAGAGG AAAGAACATG GAGATATTTG AAGGGTTTGA AAAAACTTCC TAAACTACCA AAGGATTATA CTCGTGTTAG ATTGGTGAAT TATGGTGGAA AGATTGCAGT TTTGTGGGAG GAGGATGTCC GTGTTGGAGA CCCTCAGAAG AAGATGATTT GGTGTGCTGA GATTACGCTT GAAAGGCGCA ATGCACACAA GATTTATGGG AAGATTGAGT GGTGTGACGT TGTGCTTACT GTCCCCAACC CGCGTCTCGA GATTGTACTA CCCGATTCTA TCTTTTGCGT GATAGATAAG GTAATCTACT ATTATAATGA AATTTCCAGA ATGCTCGAAT GGTATGACCC TCAAGGAAGC TCGCGGGGAA GTTTGAAGGG TTTGGAAGTA CTACCTGAAT TACCTCTATT GTCAGTTACT TGTGTTACAT TAGTGGATTC TGATGGAAAG ATTGCGGTTT TTTGGGAGAA GAAAGTGTGC CGTCCTATCG GCTATAACAA GAAGATGATT TGGTGTGCTG AGATTGCCCT TGAAAGGCGC AATGCACAAG AGATTTATGG GAAGATTGAG TGGTGTGATG TTGTGCTTAC ACTGCCCAAG TCATGTTTTA TATATGAGTT TAATGCTGTC AGTATCACTG TTTGA
Length1545
Protein Sequence
Protein Residue
Map Locationscaffold_6: 20271276.. 20273885
Download Sequence
A.thaliana
AGI-codeAT4G11750.1
DescriptionGalactose oxidase/kelch repeat superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
6.9282 Ahg486927 cation exchanger 4
8.3666 Ahg947106
16 Ahg901222 homeobox-3
19.799 Ahg312231 leucine-rich repeat/extensin 1
24.1039 Ahg494580 RmlC-like cupins superfamily protein
24.3311 Ahg945462
29.0861 Ahg906590 Cysteine/Histidine-rich C1 domain family protein
29.6648 Ahg338146 KNOX/ELK homeobox transcription factor
29.7489 Ahg351609 Protein of Unknown Function (DUF239)
30.3974 Ahg921700 ENTH/VHS/GAT family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression