Detail



ID : Ahg328082

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|328082|fgenesh1_pm.C_scaffold_7000309
Sequence
ATGGGGTGGC TAACTAAAAT CCTTAAAGGT TCTAGCCATA AGTTTTCGGA TGGACAATGT AATGGAAGAT ATAGAGAGGA TAGAAACTTG GAAGGTCCTC GTTATTCTGC GGAAGGATCT GATTTTGACA AAGAAGAGAT TGAATGTGCT ATTGCACTCT CTCTTTCTGA ACAAGAACAT GTAATTCCAC AAGATGACAA AGGAAAGAAA GTAATCGAGT ACAAATCTGA AACCGAAGAA GATGATGACG ATGAGGATGA GGATGAAGAT GAAGAATTCA TGAGAGCTCA GCTTGAGGCA GCAGAAGAAG AGGAAAGACG GGTAGCTCAA GCTCAAATCG AGGAAGAAGA GAAAAGGAGA GCTGAAGCTC AACTAGAAGA AATAGAGAAA CAGCTTGCAA AAGCTCGATT AGAAGAGGAA GAAATGAGGC GTTCTAAAGC CCAATTGGAG GAAGATGAGC AACTCGCCAA GGCCATTCAA GAAAGTATGA ATGTGGGATC TCCTCCTCGA TATGATCTAG GAAATATACT TCAACCATAT CCCTTCCTCA TTCCATCTAG TCACGGGATA TGCGCCGGTT GCCAAGCTGA GATTGGACAT GGAAGGTTTC TGAGTTGCAT GGGTGGCGTT TGGCATCCTG AATGTTTCTG TTGCCATGCA TGTGATAAGC CCATCATAGA TTATGAGTTC TCAATGTCGG GAAATCGGCC TTATCACAAA TTATGTTACA AGGAGCAGCA TCATCCTAAA TGTGATGTTT GCCATAATTT TATTCCGACA AATCCAGCTG GTCTTATTGA GTATAGGGCA CATCCCTTTT GGATGCAAAA GTATTGTCCT TCACATGAGC GTGATGGAAC TCCTCGGTGC TGCAGTTGTG AGCGAATGGA GCCAAAAGAT ACAAAATATC TCATTCTTGA TGATGGTCGA AAACTGTGTC TTGAATGTCT CGACTCAGCC ATTATGGACA CTCATGAATG CCAACCATTG TACCTTGAGA TACGTGAATT TTACGAAGGC TTACACATGA AAGTGGAACA GCAAATTCCT ATGCTGTTGG TGGAGAGATC AGCTCTAAAC GAAGCTATGG AAGGAGAGAA ACACGGACAT CATCATTTAC CTGAAACTAG AGGACTTTGT TTGTCTGAAG AACAAACTGT CACCACGGTG TTAAGGAGAC CAAGAATTGG GGCAGGCTAC AAGTTAATAG ACATGATCAC AGAGCCTTGC AGGCTGATAC GCCGTTGTGA AGTCACTGCG ATTCTCATTT TATATGGACT TCCTCGTTTA TTAACTGGGT CAATCCTTGC TCATGAGATG ATGCATGCGT GGCTTCGACT AAATGGGTAT CCAAATCTTA GACCAGAAGT GGAAGAAGGG ATCTGTCAGG TTTTAGCTCA CATGTGGCTG GAATCTGAGA CTTATGCTGG CTCTACATTA GTAGATATCG CATCGTCTTC TTCCTCATCA TCATCATCGG CTGTGGTGTC AGTATCGTCG AAGAAAGGTG AGAGGTCTGA TTTTGAGAAG AAACTTGGTG AGTTTTTCAA GCATCAAATC GAGTCGGATT CTTCATCGGC ATATGGGGAT GGGTTCAGGC AAGGTAACCA AGCAGTTCTT AAGCATGGTC TGAGGCGAAC CCTCGACCAT ATTCGCTTGA CCGGTACATT TCCTTAA 
Length1677
Protein Sequence
Protein Residue
Map Locationscaffold_7: 1543682.. 1546371
Download Sequence
A.thaliana
AGI-codeAT4G36860.1
DescriptionLIM domain-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
9.48683 Ahg314047 Transducin/WD40 repeat-like superfamily protein
11.6189 Ahg486261
15.4919 Ahg479051 NUP50 (Nucleoporin 50 kDa) protein
16.4317 Ahg473344 organellar single-stranded DNA binding protein 4
20.2485 Ahg323999 Structural maintenance of chromosomes (SMC) family protein
22.5832 Ahg496364 Arabidopsis thaliana protein of unknown function (DUF794)
23.0868 Ahg897711 SWIB complex BAF60b domain-containing protein
27.1662 Ahg938312 FKBP-type peptidyl-prolyl cis-trans isomerase family protein
30.3315 Ahg492585 SNARE associated Golgi protein family
36.2353 Ahg932607 membrane-associated progesterone binding protein 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression