Detail



ID : Ahg328320

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|328320|fgenesh1_pm.C_scaffold_7000547
Sequence
ATGATCGGAA ATAGTGTCAA GGAAGAGGTG AAGAAGCAGT TTTGGCTCTC TGCTCCACTC ATCGGCGTCA GCCTCCTCCA ATATTCTCTC CAAGTTATCT CCGTCATGTT CGTCGGCCAT CTCGGCTCTC TTCCTCTCTC CGCCGCCTCC ATCGCCACCT CTTTCGCCTC CGTCACCGGC TTCACTTTCC TGATGGGTAC AGCGAGTGCG TTGGAGACAC TTTGTGGGCA ATCTTACGGA GCAAAGATGT ATGGGAAGCT AGGCATTTTC ATGCAGAGAG CTATGTTTGT TCTGCTCATA CTTTCAATTC CTCTCTCGAT GGTTTGGTTT TACACTGAGG ACATTCTCGT CTTTGTCCAC CAAGACAAGT CCATAGCGAG ACTTGCAGGC TCATACGCTA GATACATGAT CCCTAGCATC TACGCCTACG CGCTTCTTCA ATGCCTAAAC AGGTTCTTGC AAACGCAAAA CAATGTGTTC CCTGTATTTG TGTCCTCTGG AATCACTACT TGTCTTCACG TTCTTCTTTG TTGGGTCTTC GTGTGGAAGT CTGGTTTAGG ACACAGGGGA GCTGCTCTTG CTATCTCTGT CTCTTATTGG GTCAATGTCA TTCTCCTCTC GTGTTATGTC AAGTTCTCAG CTTCTTGCTC ACAAACTTGG ACTGGTTTCT CTAAAGAGTC TTTTAGCCAC ATCCCTGCTT TTATGAAGCT CGGTTTTCCT TCTGCGGTTA TGGTCTGCTT AGAGCTCTGG TCGTTTGAGC TTTTGGTTCT CTTGTCAGGC TTACTTCCCA ATCCGGTTTT AGAAACTTCA ACTCTTTCAA TCTGCCTTAA TACATCATTA ACTGTCTGGA TGATCCCGGT TGGCCTTGGT GGCACAGCAA GCACGAGGAT CTCGAACGAG TTAGGAGCAG GGAATCCAAA AGGCGCAAAG CTGGCTGTAC GTGTGGTTGT AGCCACAGTA GTTGTAGAGG GTATTATGAT TGGATCGGTT TTGTTGGCGA TTCGGAATAA ATTGGGATAT GCTTTCAGCA GCGATCCAAA AGTCATCAAA TATGTAGCAT CGATGATACC AATTGTCGCT GCAGGCAACT TCCTCGACGG ATTCCAATGC GTTCTGTCAG GGGTTGCTAG AGGATGTGGA TGGCAGAAGA TTGGAGCTTG TGTGAATCTC GGCTCATATT ATCTAGTTGG AGTTCCACTG GGGTTATTAC TCGGTTTCCA TTTACATTTT GGTGGTCGGG GCCTTTGGCT TGGAATCGTA TCAGCCTTAG TTGTTCAAGT GCTGTCTCTT TCCATCATCA CATTAGTTAC AAACTGGGAT AAAGAGCAAA CCATGCGGCC TTCCACTTTC GCCGCCATAA ACTTCGCTCA TGTAACTTTT TGTTGCCAAA AGTCCTGTAA ATAA 
Length1404
Protein Sequence
Protein Residue
Map Locationscaffold_7: 2693386.. 2695220
Download Sequence
A.thaliana
AGI-codeAT1G73700.1
DescriptionMATE efflux family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5.2915 Ahg488180 Protein of unknown function (DUF155)
5.47723 Ahg899894 WPP domain protein 1
10.0995 Ahg484066 O-fucosyltransferase family protein
26.2488 Ahg920333 glyoxal oxidase-related protein
30.05 Ahg477806 D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein
30.7896 Ahg492374 tryptophan aminotransferase related 2
38.0657 Ahg921758 glucose-6-phosphate dehydrogenase 3
40.2492 Ahg934248 pentatricopeptide (PPR) repeat-containing protein
46.7868 Ahg906113 PRLI-interacting factor, putative
50.4777 Ahg489601 DNAJ heat shock N-terminal domain-containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression