Detail



ID : Ahg328405

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|328405|fgenesh1_pm.C_scaffold_7000632
Sequence
ATGACGATAA TGACGATGAT AATGAAGATG GCTCCATCCA AATCCGCACT GATACGCTTC AATCTAGTCT TGTTGGGTTT CTCTTTTCTT CTCTACACTG CCGTTTTTCT CCACCCTTCT TCATCAGTAT ACTTCAGCAG TGGAGCTTCC TTTGTTGGAT GCTCCTTTCG TGATTGCACA CCCAAGGTAG TGAGAGGAGT GAAGATGCAA GAACTCGTTG AAGAGAACGA AATAAACAAC AGAGATTTGC TAACCGCTAG TAACCAAACC AAGCTGGAGG CGCCAAGCTT CATGGAAGAG ATTTTAACAA GAGGGTTAGG GAAAACAAAG ATAGGGATGG TGAACATGGA AGAATATGAT CTTACTAATT GGAAACGTTA TGGAGAAACG GTGCACATAC ATTTTGAGCG TGTCTCTAAG CTGTTCAAAT GGCAAGACTT GTTCCCCGAG TGGATAGATG AAGAGGAAGA AACCGAGGTT CCCACATGTC CTGAGATACC GATGCCAGAT TTTGAAAGCG TTGAGAAGTT GGATTTGGTA GTAGTGAAGT TGCCTTGTAA TTATCCTGAA GAAGGGTGGA GAAGAGAGGT TTTGAGGTTG CAAGTGAACC TAGTTGCGGC TAACTTGGCA GCCAAGAAAG GGAAGACGGA TTGGAGATGG AAGAGCAAAG TGTTATTTTG GAGCAAATGT CAACCGATGA TTGAGATTTT CCGGTGTGAT GATTTGGAGA AGAGAGAGAC AGATTGGTGG TTGTATCGCC CTGAGGTGGT TAGGTTACAA CAGAAGCTTA GTTTGCCAAT CGGATCTTGC AATCTTGCTC TTCCTTTGTG GGCACCACAA GGTGTAGACA AAGTGTATGA CCTATCGAAG ATAGAAGCAG AGACAAAACG ACCAAAACGT GAAGCCTACG TAACAGTCCT CCATTCTTCC GAGTCTTATG TCTGTGGTGC CATAACTTTG GCTCAAAGCC TTCTTCAGAC AAACACCAAA CGCGATCTTA TCCTTCTCCA CGATGATTCC ATCTCCATTA CCAAACTTCG AGCTCTCGCG GCCGCAGGAT GGAAGCTTCG TCGGATCATC CGAATAAGAA ACCCACTAGC CGAGAAGGAC TCTTACAATG AATACAATTA CAGCAAGTTT CGACTTTGGC AATTGACAGA TTATGACAAA GTGATCTTCA TTGATGCTGA CATCATCGTC CTACGTAACC TAGATCTTCT CTTCCATTTT CCTCAGATGT CAGCCACCGG AAATGATGTC TGGATATTTA ATTCAGGCAT CATGGTCATC GAGCCTTCTA ATTGTACGTT TAGTACGATC ATGAGCCAGA GAAGCGAGAT CGTTTCATAC AACGGCGGAG ATCAAGGGTA CCTAAACGAG ATATTTGTGT GGTGGCACCG ATTGCCTCGA CGAGTAAACT TTCTGAAGAA CTTCTGGTCG AACACAACCA AAGAAAGAAA CATGAAGAAC AACCTCTTCG CTGCGGAGCC TGCTCAGGTC TACGCGGTCC ACTACTTAGG TTGGAAACCA TGGCTTTGCT ATAGAGACTA CGACTGCAAC TACGACGTGG ATGAGCAATT AGTGTACGCT AGCGATGCGG CTCACGTTAG GTGGTGGAAA GTTCACGACT CCATGGACAA AGCTTTGCAA AAGTTTTGCA GGCTGACGAA GAAGAGGAGA ACGGAGATCA ACTGGGAGAG GAGGAAAGCA AGGCTTAGAG GTTCCACTGA TTACCATTGG AAGATCAATG TCACTGATCC AAGACGACGT CGTTCTTATT TGATTGGTTA A 
Length1791
Protein Sequence
Protein Residue
Map Locationscaffold_7: 3096261.. 3099436
Download Sequence
A.thaliana
AGI-codeAT4G33330.2
Descriptionplant glycogenin-like starch initiation protein 3
TAIR curator summary
Alias[GUX2][PGSIP3][glucuronic acid substitution of xylan 2][plant glycogenin-like starch initiation protein 3]
Gene coexpression
MR
MR Locus Description
31.0966 Ahg949069 transposable element gene
48.0833 Ahg316947 Pectin lyase-like superfamily protein
60.1498 Ahg483920 Signal transduction histidine kinase
71.5332 Ahg888244
79.2465 Ahg917658 subtilase 4.13
85.3522 Ahg481664 transposable element gene
92.1412 Ahg892274 SGNH hydrolase-type esterase superfamily protein
99.6394 Ahg331706 oligopeptide transporter 9
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression