Detail



ID : Ahg328774

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|328774|fgenesh1_pm.C_scaffold_7001001
Sequence
ATGTCGTGGC AAACTTACGT TGATGAACAT TTGATGTGTG ATGTTGGCGA TGGTCAAGGA CACCACCTTA CCGCTGCTGC TATCGTTGGT CATGATGGTA GCGTTTGGGC TCAGAGCTCC AACTTTCCTC AGTTCAAGGG ACAGGAGTTC AGTGATATAA TGAAAGATTT CGATGAACCG GGTCACTTGG CACCAACAGG GTTATTCCTA GCAGGAGCTA AGTACATGGT TATCCAAGGC GAGCCCGGGG CTGTAATCCG TGGCAAGAAG GGAGCAGGAG GCATAACGAT AAAGAAAACA GGACAGTCAT GTGTGTTTGG GATCTACGAA GAGCCAGTGA CACCAGGACA GTGCAACATG GTCGTCGAAA GGTTGGGTGA TTACCTCCTC GAACAGGGTC TCTAG 
Length405
Protein Sequence
Protein Residue
Map Locationscaffold_7: 4973177.. 4974110
Download Sequence
A.thaliana
AGI-codeAT4G29340.1
Descriptionprofilin 4
TAIR curator summaryProfilin is a low-molecular weight, actin monomer-binding protein that regulates the organization of actin cytoskeleton in eukaryotes, including higher plants. PRF4 and PRF5 are late pollen-specific and are not detectable in other cell types of the plant body including microspores and root hairs. Immunocytochemical studies at the subcellular level reveal that both the constitutive and pollen-specific profilins are abundant in the cytoplasm. In vegetative cell types, such as root apical cells, profilins showed localization to nuclei in addition to the cytoplasmic staining.
Alias[PRF4][profilin 4]
Gene coexpression
MR
MR Locus Description
3.31662 Ahg947031
8 Virus1737
10.4881 Ahg933899 F-box family protein with a domain of unknown function (DUF295)
13.4164 Ahg919043 snoRNA
14.4914 Ahg934328 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
16.1245 Ahg930395
18.4391 Ahg923562 Membrane trafficking VPS53 family protein
24.3721 Ahg937113
29.6648 Ahg915761 ECA1 gametogenesis related family protein
31.305 Ahg939794
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression