Detail



ID : Ahg329299

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|329299|fgenesh1_pm.C_scaffold_7001526
Sequence
ATGAAAAATG CAATTGGAGA TACTTCTAGC TCACAGGATC TTCAGCAATG CATTGGGTCT GCAGTGGTTG CCATGGGACC AGTAAAGCTA CTGACACTTC TTCCTATCAC TCTTCATGCT GAGAGTCACT CATGCACAAA TGCTTGGCTA ATTCCTATCT TAAGAAAATG TATAATTGGA GCATCTCTTT CGTATTATGT TGATCGCATT GTTCCGCTTG CAAAATCAGT GATGCTTGCT TCGAAAGGAG CTAAAAAGTC AGCTCCCGGC AAAGAGTTGC GGGCTTGTGG TCATGAGCTT CTGAGACTGT TACCTGCCTT TTGTAACTAT CCAGTTGATG TGCCCAAAAA TTTTGGATCG TTAGCCAAAC TGATGGTTGA ATTTATAAAA AATAAATCTT TCATGCATGA AGCTGTGGCT CTTTCTCTAC AGATGCTTGT AAATCAGAAT AAAAGAATGC CTAAGCCCAG TACAGATATG GGAGAAGCAA AAGCCATAAG CGAAGAAGAT GCAACAACTG AGCTCGAAAG TGGATTTCAC TATTCGAAGA AAGCTTCAAC TAAAAACATG AAGGCTTTGG CATCAAGCTC GACAGAGTTG CTTCAAACTC TTGTTGATGT ATTCACTGTT TCAGGCACAG AGATCAGTGC AGACTTTAAG GCTGCAATTG GATGCTTAGC TTCTACTCTG GATTCGTCAG TTAGGAAAAA GATTCTAATA TCCTTGCTAA ATAAGTTTGA TCCTGCTGGT GAAAACGAGA CTGAGGGGCA GGTCAATCAA TCGAATGATT CTATGGATGA AGAAAAAGAA AAGTGCAGTG CCACAAAGAC ACAGTTAAAG AGGAGTGCTG TGTTGGGTCT TGCATCTTCA TTTGTTGAAG GAGCCAAGGA AGATCTTATT GAGTTGATTT ATAATCTTGT TCGCCAAAGT TTTCAGGCCA CCAACGAGGC TGATCTTCGT GGGGCATATG ATACTCTGAG CAGAGTTCTA GAGGAACATG GTTGGTTTTG TGCATCTCAT TTTGCAGAAG TAATAGAGAT GTTACTCAGC CATAAAACTC CAGAGGATGC GGCGTCTTCT AGAAGCCGAT TTGCATGTCT CCACGTTCTA ATGGCTCACG GAATTCAGTC AAGCACCGAG GAAGAGAATG AGAAGGCTTT CCTTATTCTG AACGAGATGA TCTTGACACT TAAAGATGGG AAAGAAGAAC ATAGGAAAGC AGCTTGTGAT GCACTGGTTA TGGTGTATAC CACCCTGAAA AATTCATCAT CTATCACCAG TGATGAACTT TGTCTTAAAT TGATTAACAT GATAACGGGT TATATTCCTG GATCGTCTCC GCACATAAGG AGTGGAGCAG TGTCTGCATT ATCTGTCTTG ATATACAAAG ACCCTGAGAT CTGCCTATCT TCACCTGAGC TTCTTTCATC TGTTTTATCA TTGCTTCACA CCAAATCAAT CGAGATAATA AAAGCTGTTT TGGGTTTTGT GAAAGTTTTA GTCTCGACAT CACAAGCCCA GGACTTGCAG AGTCTATTAC AGAACCTCTT ATACGAAATT CTCCCTTGGT CGTCTGTTTC AAGACATTAT TTTAAGTCAA AGGTAACGAT CATAGTTGAG ATTATGGTAA GGAAGTGCGG CACCCGCGCA GTCCAGTTAG CCACACCAGA CAAGCACAAA AATTTCATCC AGACAGTTTT AGAGAACCGT TCGGGGAAAT CAAAAGACAA AGAAGAGACC AATGATTCAC AGACTACATC CATCGATTCA TCCAGAGAGC CGCGGAAAAG AAATTACAGA GAAGCTTCAT CAGAAACTAC AGCCAAACAA GACGGCAACA AATTCAAACG GCAAAAGAGA ACACATCAAC AACACACACC TGCTTCCGGC ATTAATGGAA GTAGAACAGG ACCACAGCGC CCCGCTAACA GAAGCTTCGG AAAACATAAG GAAGCTTCTG GAAACAATCA CAAGTCAGGA AAAGAAACAC GAAAGCCACA GAAGAACAGA TTCAGGAAAG CACCATGA 
Length2028
Protein Sequence
Protein Residue
Map Locationscaffold_7: 7476197.. 7480374
Download Sequence
A.thaliana
AGI-codeAT4G23540.1
DescriptionARM repeat superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
14 Ahg482032 elongation factor family protein
20.0998 Ahg478024 GTP-binding family protein
23.3238 Ahg483090 Transducin/WD40 repeat-like superfamily protein
27.5681 Ahg486246 Domain of unknown function (DUF1726) ;Putative ATPase (DUF699)
33.0908 Ahg935789 transducin family protein / WD-40 repeat family protein
44.9778 Ahg480608 CCAAT-binding factor
47.4868 Ahg476456
48.4252 Ahg934754 ubiquitin-protein ligases
50.0999 Ahg490823 mitochondrial heat shock protein 70-1
53.8516 Ahg948747 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression