Detail



ID : Ahg329582

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|329582|fgenesh1_pm.C_scaffold_7001809
Sequence
ATGTCTACAA CAAAACTCAT CTCGCTCATT GTCTCCATAA CATTCTTCCT CTCTCTCCCA TCCTCCTATG CACAAACCGT CGTAAAAGCA TCGTATTGGT TCCCTGCGAG TGAATTTCCG GTTACCGACA TTGACTCATC TCTCTTCACT CATCTCTTTT GCGCTTTCGC TGATCTCAAC TCTCAAACCA ATCAAGTCAC TGTCGCCTCC GCGAACCAAC CTAAATTCTC AACCTTTACA CAAACTGTCC AACGCAGAAA CCCTTCTGTT AAAACCCTTT TGTCTATCGG CGGTGGAATC GCGGATAAAA CCGCGTATGC TTCTATGGCA AGCAACCCCA CTTCTCGAAA ATCGTTCATT GATTCTTCGA TAAGACTCGC TAGATCATAT GGATTCCACG GTCTTGATCT AGACTGGGAG TATCCGAGCA GCGCGACGGA GATGACCAAC TTCGGGACAC TACTTCGAGA ATGGCGATCA GCTGTTGTAG CCGAAGCTAG TAGCAGCGGT AAACCGCGTT TGCTTTTGGC AGCTGCGGTT TTCTACTCCA ACAATTACTA TTCGGTACTG TACCCGGTTC AATCCGTTGC TAGCAGCCTG GATTGGGTTA ATCTTATGGC TTATGATTTT TACGGACCGG GTTGGTCCAG AGTGACCGGT CCACCAGCCG CTCTGTTTGA TCCTTCAAAC GCAGGTCCAA GCGGAGACGC GGGAGCAAGG TCATGGATTC AAGCTGGACT TCCGGCGAAG AAAGCAGTCT TGGGATTTCC ATACTACGGC TACGCGTGGC GTCTCACAAA CGCTAACAGT CACAGCTACT ACGCGCCTAC CACAGGAGCT GCGATATCAC CGGATGGTTC GATAGGTTAC GGTCAGATAA GGAAGTTTAT AGTAGATAAC GGAGCAACAA CGGTTTATAA CTCGACGGTG GTCGGAGATT ATTGTTACGC CGGCACAACT TGGATTGGTT ATGACGATAA TCAGAGTATT GTGACGAAAG TTAGATACGC TAAGCAGAGA GGTCTTCTCG GTTACTTCTC GTGGCATGTT GGTGCTGACG ATAATTCTGG TTTATCTCGT GCAGCTTCAC AGGCATGGGA TGCTACGACG GCAACCACCA GAACTATACA GAAGGTTTAA 
Length1140
Protein Sequence
Protein Residue
Map Locationscaffold_7: 9365693.. 9367341
Download Sequence
A.thaliana
AGI-codeAT4G19810.1
DescriptionGlycosyl hydrolase family protein with chitinase insertion domain
TAIR curator summary
Alias[ChiC][class V chitinase]
Gene coexpression
MR
MR Locus Description
4.24264 Ahg490313 glutathione S-transferase PHI 2
10.9545 Ahg340627
16.6733 Ahg484459 Cytochrome P450 superfamily protein
17.4929 Ahg920711 Kunitz family trypsin and protease inhibitor protein
25.923 Ahg478781 Glycosyl hydrolases family 32 protein
26.9815 Ahg476851 extensin 4
27.5681 Ahg470264 glutathione S-transferase 6
31.4166 Ahg470263 glutathione S-transferase 7
33.3167 Ahg481994 cytochrome P450, family 71, subfamily A, polypeptide 13
34.4674 Ahg926884 pathogenesis-related gene 5
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression