Detail



ID : Ahg329973

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|329973|fgenesh1_pm.C_scaffold_7002200
Sequence
ATGGCGACGG AGATGAACGA GAATCTGATC AACTCTTTCG TAGAGATAAC TTCTTCATCA AGAGAAGAAG CTACTTTCTT CCTCGAAAGT CACCGTTGGA ATCTAGACGC TGCCGTTTCA ACTTTCCTCG ATAACGATGC CGCCGCAGCC GCAATCGCCG AACCAAACCC TACCGGACCA CCACCGATTG CCGCTGCTCA ATCTCCTTCT CAATCTCACT CTCCCGATTA CACTCCTTCT GAAACCTCTC CTTCTCCTTC GCGATCACGA TCTCCTTCTC CGTCTTCTCG CGCTGCTCCC TACGGTCTCC GATCGAGAGG CGGTGCTGGA GAGAATAAAG AAAGTGAGAA TCCGTCTGGT AGTCGGACTT CTAGGAGTCG TCAACACGCT GGGAATATAC GTACGTTCGC CGATCTGAAC CGTTCTCCGG CTGATGGTGA GGGCAGTGAT TCTGATGAAG CGAATGAGTA TTATACTGGT GGACAAAAGA GTGGGATGAT GGTACAAGAT CCTAAGAAAG CGAAAGACGT TGATGCACTT TTTGATCAAG CTAGGCAATC AGCTGTAGAC AGACCTGTTG AATCATCAAG AGCACCTTCT ACAAGCTTCA CTGGAGCTGC ACGATTGTTG TCTGGTGAAG CTGTTTCGTC TTCTCCTCAG CAACAACAGC AAGAGCAGCC TCAAAGGATT ATGCACACCA TCACTTTCTG GTTGAATGGT TTCACTGTTG ATGATGGTCC GTTAAGGGGG TTTACTGACC CTGAAAACGC AGCTTTTATG AATAGCATCT CAAGGTCAGA GTGCCCCAGC GAACTCGAAC CAGCAGATAG GAAGATCCCA GTTCATGTCG ACCTTGTCAG GCGTGGAGAA AATTTCACCG AACCACCAAA GCCCAAAAAC CCATTCCAAG GTGTAGGAAG AACCCTAGGA GCCAGCGGAT CCGGTTCAAA TTCAGCACCA CCAGCTTCAT CCGCCCCAAT GAACGCAGCA CCAGCACCAT CAAGAGGGCT AGTTGTAGAT CCAGCAGCAC CGACAACCTC TATCCAGCTC AGATTAGCAG ACGGAACACG CCTTGTCTCC AGGTTCAACA ACCACCACAC CGTCAGAGAC GTACGTGGGT TCATCGACGC TTCAAGACCC GGTGGCTCCA AAGAGTACCA GTTACTAACC ATGGGGTTCC CTCCTAAACA ATTGACAGAC TTGGACCAAA CCATCGAGCA AGCTGGTATT GCTAATGCCG TCGGTTCTTT GATTTCATTT CTACTCTTTC TTCTTCTTCT TCTTCTTCCT CTCGCTCTTT ATCTCTCCAA ATTGGTTTCT GTAATTATGA TCAAGCAGAT ATTTGGGAAA TTACCCAGAA AACCTTCGAA ATCATCGCAT AATGACTCGA ATCCAAATGG AGAAGGTGGG CCTACATCGA AATCGTCAGC ATCGAATTCG AATGGAGCAA ATGGGACTGT TATTGCTCCT TCCTCAACAA GTTCTAACAG AACGAATCAA GTCAATGGGG TTTATGAAGC ATTGCCAAAC TTTAGGGATG TTCCTAGCTC GGAGAAACCT AATCTGTTTA TCAAGAAGTT GAGTTTGTGT TGCGTTGTGT TCGACTTTAG TGATCCGTCC AAGAATCTGA GAGAGAAAGA GATAAAGAGA CAGACTTTGC TGGAGCTTGT TGATTATATT GCAACGGTTT CTACAAAGTT GAGTGATGCT GCGATGCAAG AGATTGCGAA AGTGGCTGTG GTTAATCTTT TCAGGACGTT TCCTACTGCG AATCACGAGA GTAAAATTCT TGAAACGCTT GATGTGGATG ATGAGGAACC TGCTTTAGAG CCGGCTTGGC CTCATCTTCA AGTTGTTTAT GAGCTTCTTC TCAGATTTGT GGCCTCGCCT ATGACTGATG CGAAGCTTGC AAAGAGATAT ATCGACCATT CTTTCGTCTT GAAGCTCTTG GATTTGTTTG ACTCTGAAGA CCAAAGAGAG AGGGAATATC TAAAGACCAT TCTGCATCGG ATATACGGGA AATTCATGGT GCACCGACCC TTTATCAGAA AGGCCATCAA CAATATCTTC TACAGATTCA TTTTCGAAAC TGAAAAGCAT AATGGCATTG CAGAGTTGCT TGAGATTCTA GGAAGTATAA TCAACGGTTT CGCTTTGCCG TTAAAAGAGG AGCATAAGCT CTTCCTAATC CGGGCCTTGA TTCCACTCCA CAGACCTAAA TGTGCATCTG CCTATCATCA ACAGCTATCT TATTGCATTG TTCAATTTGT AGAGAAAGAC TTTAAGCTTG CCGATACCGT CATTAGAGGC CTTCTAAAGT ATTGGCCTGT GACTAACAGT TCAAAGGAAG TTATGTTTCT TGGGGAGTTG GAAGAAGTTT TGGAAGCAAC TCAAGCAGCT GAGTTTCAGC GATGTATGGT TCCTTTATTC CGTCAAATCG CCCGATGCCT CAACAGTTCA CATTTTCAGG TGGCTGAAAG GGCTCTGTTT CTGTGGAACA ACGATCACAT AAGAAACCTG ATTACTCAAA ACCATAAAGT GATAATGCCA ATCGTGTTCC CGGCTATGGA GAGAAACACA CGGGGCCATT GGAACCAAGC AGTTCAGAGT CTGACTTTGA ATGTGAGAAA GGTATTGGCA GAGACAGACC AAATTCTGTT TGATGAATGC TTAGCCAAGT TCCAAGAAGA TGAAGCAAAT GAAAACGAGG TTGTAGCCAA ACGAGAAGCA ACATGGAAGC TTTTGGAAGA CTTGGCAGCT TCCAAATCCG TAAGCAACGA GGCAGTGCTC GTCCCCAGAT TCTCATCATC GGTTACTCTT ACAACCGGTA AAACTTCGGG TAGTTGA 
Length2847
Protein Sequence
Protein Residue
Map Locationscaffold_7: 12140260.. 12144771
Download Sequence
A.thaliana
AGI-codeAT4G15415.2
DescriptionProtein phosphatase 2A regulatory B subunit family protein
TAIR curator summaryB' regulatory subunit of PP2A (AtB'gamma)
Alias[ATB' GAMMA]
Gene coexpression
MR
MR Locus Description
3.4641 Ahg487152 Protein kinase superfamily protein
4.69042 Ahg951497 SKP1/ASK1-interacting protein 2
10.247 Ahg941621 Zn-dependent exopeptidases superfamily protein
12.6886 Ahg485538 SAC domain-containing protein 8
16.9706 Ahg944752 Protein of unknown function (DUF2012)
17.3205 Ahg494586 casein kinase I-like 7
20.8327 Ahg471614 ubiquitin carrier protein 1
28.775 Ahg950590 smr (Small MutS Related) domain-containing protein
32.0624 Ahg342166 pumilio 5
36 Ahg492906 Cyclin family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression