Detail



ID : Ahg330253

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|330253|fgenesh1_pm.C_scaffold_7002480
Sequence
ATGTCCGATC ATCAGAAAAT CCATCCGGTA AGCGACCCGG AAGCGCCACC ACATCCAACG GCTCCCCTTG TTCCACGTGG CTCCTCGAGA TCGGAACACG GTGATCCCAC CAAGACACAG CAAGCAGCAC CGTTGGATCC TCCGAGAAAG AAGAAAGGAT CAAGAAGTTG TTGGTGCAGA TGCGTGTGCT ACACACTTCT TGTCCTCTTT CTCCTTATTG TTATCGTTGG AGCGATCGTT GGTATACTCT ACCTTGTCTT TAGACCAAAA TTACCGGATT ACAATATTGA CCGGTTACAG CTCACCCGGT TTCAACTAAA CCAAGACTTG AGTTTATCTA CCGCGTTTAA CGTTACCATA ACCGCGAAAA ATCCCAACGA GAAAATCGGA ATTTACTATG AAGATGGAAG CAGAATTAGT GTCTTGTACA TGCAAACCAG ACTCAGTAAT GGGTCATTGC CGAAATTCTA CCAAGGACAT GAGAATACGA CTATTATATC CGTAGAAATG ACTGGTTTTA ATCAGAATGC AACAAGTATA ATGACGACAT TGCAAGAGCA ACAACGGTTA ACAGGAAGCA TACCGTTGCG GATTAGAGTT ACCCAACCGG TTCGGATCAA ACTCGGGAAA TTAAAGTTGA TGGAAGTAAG ATTTTTGGTT AGGTGTGGTG TATCCGTTGA TAGCTTAGCT GCTAACAGTG TGATTAGGGT TAGAAGTAGT AACTGCAAAT ACAGGTTTAG ACTATAA 
Length747
Protein Sequence
Protein Residue
Map Locationscaffold_7: 18646865.. 18647694
Download Sequence
A.thaliana
AGI-codeAT5G36970.1
DescriptionNDR1/HIN1-like 25
TAIR curator summaryNDR1/HIN1-like protein, expression induced during incompatible response to a pathogen, expression is at least partly dependent on the salicylic acid signaling pathway
Alias[NHL25][NDR1/HIN1-like 25]
Gene coexpression
MR
MR Locus Description
4 Ahg476541 Calcium-dependent phosphotriesterase superfamily protein
4.12311 Ahg929930
4.47214 Ahg474673
4.69042 Ahg941288 Glycosyl hydrolase superfamily protein
8.24621 Ahg470959 Calcium-dependent phospholipid-binding Copine family protein
10.0995 Ahg486481 Glycosyl hydrolase superfamily protein
11.6619 Ahg320824 cytochrome P450, family 71, subfamily A, polypeptide 12
11.8322 Ahg902471 beta glucosidase 27
12.6491 Ahg918583 Auxin efflux carrier family protein
13.2288 Ahg329886 Glycosyl hydrolase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression