Detail



ID : Ahg330390

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|330390|fgenesh1_pm.C_scaffold_7002617
Sequence
ATGAAAAATC GAATCAAAGA AGGATCCAGC ATGATTGGTG TTTATGGAAG ATCAGATGGA TCAAGCAGCA TTCTGAGTTT TAATGGATCC GAAAGTCGTG AAAGTATAGA TGACACTAAG CAAGGTCATC AAAGTTTAGT AGAATGGTTA AATGAGACAC TTCCTTATTT GAATTTACCA TGGGAGGCTT CAGAGGAAGA ATTGAGAGCA TGTTTGCTGG ATGGAACTGT CTTGTGCAAT CTCTTGAATC AGCTTAGTCC CGGTTCGATG CGAATGGGAG GTAGCTTTGA GCCTGGTTGC GTAAATAATG AGCGGTTTTT GGCAGCTATG GATGAAATGG CATTGCCGAG ATTTGAGGTT TCAGAGTTAG AACAGTTATA CAGTCTCTTA AGGCACTTAA AGCTAGTTTC TCTGATGATG GATATGATAA GAATACACTT TGTAGTTGAT AGCAACTTTA ATGATGGAGG ATCACAGTTT AAGGAAGCAT CTGAGATCAA TACGTCTCAT GCTCAAATTT TGGACTTACT AAAATCAAAT AGTTTACAAA ATACTTCTAC ACGATCGTTA TTTGACATGC TCGATAGGCT TCTTGATGAG AGCCCACAGA AGATGAATGT GTCCCATGTT TTTGTATCTA TCTTAAGAGG CATTGCGCAA GTTGTGGAGC AACGGATCTC AAATCAAGCT GAGAACCTAA AAAACCAAAA TATACTCTTT AGGGTTCGTG AAGAAAAATA TAGATCAAGA ATAAATGTAT TAGAAACTTT GGCATCTGGA ACAACAGATG AGAATGAGCT AAGGTCAAAA GAAAAAGATG TCCTCCAAAT AGAAAAGGAA AAAGAGCGTA GTGATGCTGA ACTTTCTAAG TTGAAGCAAG AACTTGAAAT TGTGAAAGAG ACACATGAAA AACAGTTTTT GGAACTAGAA TCAAATGCTC AAAAAGCTAA AGTTGAGTTG GAGAAGCAAT TAAAGGAATC AGAGTTACGT GTGGTAGAAG CAAAAGAACT TGAGAAGTTA TGTGAAACAA AAACTAAAAG ATGGGAGAAG AAAGAGCAAA CATATAAGAG CTTTATAAAC CACCAGACAG AGGCTTTGCA GGAGTTGAAA GCTACTTCTA TGTCTTTAAA ACATGAAGTC CTAAAGACAG GAGAGAACTA CTTCAAGGAT CTAAATTACT ATGGTATAAG GCTCAGAGGA GTGGCTCATG CAGCAAAAAA TTATCAGATA ATCATTGAAG AGAATCGAAG ACTTTACAAT GAAGTGCAAG AATTAAAAGG AAATATTAGA GTGTATTGCC GGATAAGACC ATTCCTTCAA GGACAAAACA AGAAACAAAC ATCAATAGAG TACACAGGTG AGAATGGTGA ACTGGTGGTT GCAAATCCCT TAAAGCAAGG CAAAGATACG TATCGGTTAT TCAAATTCAA CAAAGTCTTT GGCCCTGCAT CAACTCAAGA GGAAGTTTTC TTAGATACTA GACCGTTGAT TCGATCCATT CTTGATGGCT ACAATGTATG TATATTTGCT TACGGCCAGA CAGGTTCTGG AAAGACTTAT ACAATGAGTG GACCAAGCAT AACTTCAGAA GAAGATTGGG GTGTTAACTA TCGAGCTTTG AATGACTTGT TCCACTTAAC TCAAAGTAGA CAAAACTCAG TTATATATGA AGTTGATGTT CAAATGGTTG AGATTTACAA TGAGCAAGTT CGTGATCTAC TATCTGAGGA TGTTCCTGAT GCAAGCATGC ATTCTGTAAA ATCAACTGAA GATGTTCTCG AATTGATGAA TATTGGGTTG ATGAATAGAA CTGTTGGTGC CACAACCCTT AATGAAAAGA GCAGTAGATC ACACAGTGTT CTTTCTGTTC ATGTACGCGG TGTTGATGTC AAAACCGAAT CCGTCTTGCG TGGTAGTTTG CATTTGGTTG ATCTTGCTGG AAGTGAGAGA GTTGGTCGCT CTGAAGTAAC CGGAGAGAGA CTCAAAGAAG CTCAATATAT AAAAAAATCA TTGTCTGCTC TCGGAGATGT TATATTCGCT CTCGCACATA AGAATCCTCA TGTACCGTAT AGAAACAGCA AGCTAACACA AGTCCTCCAG AATTCTTTAG GAGGACAAGC AAAAACTCTT ATGTTTGTTC AAATTAATCC TGATGAAGAT TCATATGCTG AGACTGTAAG TACTTTGAAA TTAGCGGAAA GAGTTTCTGG TGTCGAGTTA GGTGCAGCTA GAAGCTATAA GGAAGGACGA GATGTTAGAC AACTCATGGA ACAGGTATCG AACTTGAGAG ATATGATTGC CAAGAAAGAT GAAGAACTTC AAAAGTTTCA GAACGTAAAC GTTATCCAAA AACGTGGATT AAGCAAACTA AGAATTGTCT CTCCTACTAG AAGACATTCT TTAGGAGGAG CTTTAACAAA TTCTCCAAGA AGAAGACAAG GGTCTGGTTT ACTTGGAAGA ACAACTTCAG ATTCAGCAGA TGAACGTCGC AATCAAAATG AATCTCGATC ATCGTCTAAG TTTTCTGGTG GGGCTAAAGA CAATGATATA TTTGAGGATA TTGAACTTTT AGGCCTTGAA GATTCAGATA ATGAGGAAAG ATTGAGTGAT ATCTCTGATA GTTGTCTTTC AATGGGAACA GAAACTGATG GCTCGATTAG TAGCGGTGCG ATGGGGTTGA CACTCTTCCC TGAAACCTCA AATCCTCCTG AAATGTTTGA ACAAAATGAT AAAAGAGTTA CATTGTGTTT AGAGTTCATT GTTTATCTAC TAATTGCAGA GCTAATCAGT GGCGGAGGTA GAAATTTATG TTATGGGGCT AATGTTGGAA CATCAAAGCC AGTGAAGCAT ACACCAAGAG CAGACAAAAC CAGACCTTCT CGTCTGTCGA TTTCTAACAC TTCAGCTAAG GCTTTAACAA GTTCTAAAAG ACCAATCACT GGATTTTCAT CTTCAGTAAA ACCTCTTAAC ATTAAGAGAT AA 
Length2982
Protein Sequence
Protein Residue
Map Locationscaffold_7: 20355253.. 20360673
Download Sequence
A.thaliana
AGI-codeAT5G41310.1
DescriptionP-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
32.619 Ahg897604
37.4833 Ahg928737
40.7922 Ahg891734
58.9915 Ahg925156
60.2744 Ahg926802
60.8933 Ahg894454 Xanthine/uracil permease family protein
77.6788 Ahg912952 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
79.0443 Ahg312293 cytochrome P450, family 87, subfamily A, polypeptide 2
79.1138 Ahg939849 glycosyltransferase family protein 47
84.8823 Ahg949069 transposable element gene
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression