Detail



ID : Ahg330549

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|330549|fgenesh1_pm.C_scaffold_7002776
Sequence
ATGGATGGAT CATCGGAAAA AACTACCAAT AGAATGGTAT CAATTCTACC AAATTATAAG ATTGGTAAAA CTCTTGGGCA TGGATCCTTT GCGAAAGTGA AATTAGCACT GCATGTAGCT ACTGGGCACA AAGTTGCTAT CAAAATCCTT AATCGTGCTA AGATTAAGAA CATGGGTATT GAGATCAAAG TACAAAGGGA GATCAAAATT CTAAGGTTGT TGATGCATCC TCATATCATC CGTCAATACG AAGTTATAGA GACGCCTGAT AACATTTATG TTGTGATGGA ATATGTTAAG TCTGGAGAAT TATTTGACTA TATTATAGAA AAAGGTAGAT TGCAAGAAGA CGAGGCTCGT CATCTATTTC AGCAGATCAT ATCTGGTGTG GAGTATTGTC ATCGCAATAT GATCGTTCAT AGAGATCTTA AGCCTGAGAA TATGCTTTTG GATTCGAAAT GTAACATAAA GATTGTTGAC TTTGGATTGA GTAATGTCAT GCATGATGGT CATTTTTTAA AGACTAGTTG TGGAAGCCCT AATTATGCTG CTCCAGAGGT TATTTCAGGA AAACCATATT CTGGACCAGA AGTAGATATA TGGAGTTGTG GGGTTATATT ATATGCTCTA TTGTGCGGTA CTCTTCCCTT CGACGACGAA AATATTCCTA CTCTATTCGA TAAAATAAAG AAAGGAATGT ATACTCTTCC AGATCATTTA TCATATGTTG CTAGAGATTT GATACCGAGA ATGCTTATGG TTGATCCTCT GATGAGAATT AGCATTACTG AGATTCGTCA ACATCATTGG TTCAATAATC ATGTTCCTCT TTATCTTTAT ATGCCTCCAT TAGATACAAT AGAAGAAGCT AAAAAGATTG ATGAGGAGAT AATTCAAAAA GTAGTTAACA TAGGATTTGA TAGAAACCAA GTTGTTGAAT CTCTTGTCAA TAGAATCCAA AACGAGGCTA CAATTGCATA CCATCTAATA CTAGATAACC GAAACCAAAA TTTTGTTCCT AATGACCCTT TCCAATCCAA CTTTAAAGAG ATATCGGGTG GTATATTTAA TTCGACGTTT CCAGCTGTTC AAAATATTAC TTCACATGTT GGCCATTCAT TCTCGGCATT GTATGGACTA AAATCACATG TCAAAGATGA CAAAACATGG ACCCTTGGCC TTCAGTCTCA AGGGAGTCCT CATGATATAA TGAATGAAAT TTTTAAGGCT CTTCAAAATC TAAAAGTGTG CTGGAAAAAA ATCGGACTCT ACAATATAAA ATGTAGAAGG GTCCGAAGCC TTGCTAACTA CAAGAATCAT ACAATTGAGG GTGAATGTAT TATCATCAAA TTTGAACTTC AGCTATACAA AGTACGTGAA GGCAAGTATT TGTTGGACAT CCAAAGAATT GATGGACCTC AGTTTATCTT CTTTGATATA TGTGTTGCGT TTCTCAGAGA GCTAGGGGTC CTCTAA 
Length1476
Protein Sequence
Protein Residue
Map Locationscaffold_7: 21761484.. 21773509
Download Sequence
A.thaliana
AGI-codeAT5G39440.1
DescriptionSNF1-related protein kinase 1.3
TAIR curator summary
Alias[SnRK1.3][SNF1-related protein kinase 1.3]
Gene coexpression
MR
MR Locus Description
2.23607 Ahg914971 TRAF-like family protein
3.16228 Ahg894531 Acyl-CoA N-acyltransferases (NAT) superfamily protein
33.0454 Ahg928535
46.8188 Ahg900580 Ubiquitin carboxyl-terminal hydrolase-related protein
49.2138 Ahg930374
53.5537 Ahg943018 RNI-like superfamily protein
55.9285 Ahg889885 Acyl-CoA N-acyltransferases (NAT) superfamily protein
56.7362 Ahg948117
71.2461 Ahg894156 GDSL-like Lipase/Acylhydrolase superfamily protein
71.3092 Ahg929484 F-box family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression