Detail



ID : Ahg330831

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|330831|fgenesh1_pm.C_scaffold_8000174
Sequence
ATGAGGTCTT CAACAAAGAA CATCGAACAA GCTCAAGAAA GTTGTTATCA CGAGTGGATG AGTTTGCAGT CTCAACGCAT AAATGAGGTC AAACAACTCT TAGTTCAACG ACGATCTCAC CGCGATGAAG AACACGATAA GAAGCTCCGT GAGTTAACGG GAAAGATCCT TGGAGATTTC AAAGATTATG CCGGAAAAAG AGCTGATCTT GCTCACCGAT GTAGCTCGAA CTATTATGCA CCGACGTGGA ATACTCGTTT AGAGAACGCT CTAATTTGGA TGGGTGGTTG TCGACCATCT TCTTTCTTTA GGCTCATTTA TGCTTTGTGT GGGTCACAAA CTGAGATACG TGTGACTCAG TTTCTCCGCA ACATCGACGG CTACGAATCT TCAGGTAGGG TTTTGGACGT TTTCGGTGGC GGCGGTGGCG CATCACTTAG CAATCTAAGT GCGGAGCAGC TAGCAAAAAT CAATGTGTTA CATGTAAAAA TTATAGACGA AGAAGAGAAG ATGACCAAGA AAGTCTCAAG CCTACAAGAA GACGCGGCGG ATATTCCCAT CGCCACTGTG GCTTACGAGA TGGAGAATAT CGGAGAGCCT AACATGGTGT TGGATCAAGC TTTCGACAAG CAAGAAGAAG CTATGGCCGG TTTATTGGCC CAGGCCGATA ATCTAAGGGT GGATACTTTA GCAAAGATCG TCGAGATTCT ATCGCCGGTA CAAGCAGCGG ATTTCTTACT CGCCGGGAAA AAGCTTCATC TTTCGATGCA TGAGTGGGGA ACTACGAGAG ATCGTCGCCG TCGTGAATGT ATGGTTGACG CCGAAAGCGA TACCGGAGGA GAGGAAGAAA ACTAG 
Length855
Protein Sequence
Protein Residue
Map Locationscaffold_8: 1350376.. 1351630
Download Sequence
A.thaliana
AGI-codeAT5G45830.1
Descriptiondelay of germination 1
TAIR curator summaryEncodes DOG1 (DELAY OF GERMINATION 1). A quantitative trait locus involved in the control of seed dormancy. Belongs to a novel plant-specific gene family whose members include: DOG1-like 1-4 (DOGL1-4, At4g18660, At4g18680, At4g18690, At4g18650 respectively) and DOG1. DOG1 expression is seed-specific.
Alias[ATDOG1][DOG1][GAAS5][GSQ5][DELAY OF GERMINATION 1][germination ability after storage 5][GLUCOSE SENSING QTL 5]
Gene coexpression
MR
MR Locus Description
15.2971 Ahg347481 Bromo-adjacent homology (BAH) domain-containing protein
26.6083 Ahg943016 RNI-like superfamily protein
30.1662 Ahg328109 Late embryogenesis abundant (LEA) protein
34.2053 Ahg929654 F-box and associated interaction domains-containing protein
35.8329 Ahg892531 LOB domain-containing protein 33
42.4264 Ahg487839 Pollen Ole e 1 allergen and extensin family protein
44.7437 Ahg946936
47.5395 Ahg317800
59.8999 Ahg902462 P-loop containing nucleoside triphosphate hydrolases superfamily protein
62.6418 Ahg331706 oligopeptide transporter 9
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression