Detail



ID : Ahg330904

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|330904|fgenesh1_pm.C_scaffold_8000247
Sequence
ATGGCGGCTT CTTCCTCCTC CTCTTCCGAA ATACTTCCCA AGTCGTGGCA AGTGTTCATC AATTTCAGGG GAGCAGAATT GCGCAATAGT TTCATTAGCC ATCTGGAGGG AGCCTTAGCG CTAGCCGGGA TCAAATACTA TATCGACACG AAAGAGGTCC CGAGCGAAGA TCTTAGTGTC CTTTTCGAGA GGATCGAGCA ATCTGAAATT GCACTGTCCA TCTTCTCGAG CAAGTACGCT GAATCAAACT GGTGTTTGGA CGAGCTGGTG AAAATCATGG AACAAGTCAA GAAAGAAAAA CTCCGAATCA TCCCAGTCTT CTTTAACGTG AAGCCTGAGG AGGTTAGAGA GCAGAAAGGA GAGTTCGGAC TTAAGCTATA CGGAGAAGGT AAAAGGAAAC GACCCAATAT ACCTAATTGG GAAAACGCTC TGCAGTCTGT TCCAAGCAAG ATAGGCTTGA ATTTGTCGAA TTATAGGAAC GAGAGGGAGC TCGTTGAAAA GATAGTTGAC TCGATCAAAA GAGTGCTTGC CCTAATTCCA CTGGGAAGCA GAGTAACAGA GTATCTGAAC GGGATCTCAA AAGCCTCAGG GGCAAAGAAT GTAGACAGAT TTTCGCTAAG CTCCTATGAG TTTCAATGTT CCTCCCTTGA TATATCAGTC ACCAACGATG ACAATGGAAT CACTCCGTTT CAGTGCCCAG CCACGATTGA CGAGTTATGC AAGGTAGGAG TAGAACATCT CAATGAGATC TCTACTGTAA GTTCAACTGG TAATAGTTCA TCTAGAAACA TCGAACAGCC GCCACCCCAC TACGGAATAG AACCACGCCT TAAGGAACTG GAAGAAAAGA TACAATTTGA TTGCATCGAA ACTAAAATTG TTGGAATTGT TGGGATGCCT GGAATTGGTA AAACCACTCT TGCGGAAACA TTGTATAGAA AGTGGAAACA CAGGTTTAAG AGGAGCAAGT TTATCCCAAA TGTCAGTAAG GAGAGTCAAC GAGGATTGCA AAAGAGATTG TTGGTAGAGC TGTTGATGGA TATTCATTAC AAGACAGGAT ATTCAGAGAA TGAACATGAG TTTTGTAAGG ATGCTCTTCT CCAAAAGAAA GTTTTTGTTG TTATAGATGA TGTTAGTAGC AAGGAACAGA TCAAAACTCT TTTTGGTCAA TGGGATTGGA TCAAAAAAGG TAGCAAGATT GTTATTACAT CAAGTGATGA GTCACTGCTC AAGGAACTGG TTGACGATAC TTATGTAGTC CCGAGGTTGA ACAGCACAGG AAGTTTACTG TGGTTTACCA ATCACGCCTT TGGTTTGGAT CATGCCGAAG GAAATTTCGT AAAGCTGTCC AGACACTTTC TGAATTATGC CAAAGGAAAC CCACTAGTCC TCAGAGCTTT TGGTGTAGAA CTTCGTGGGA AAGACAAGGC TTATTGGGAA CAGAGAATTA AAACATTGAA ACTAATTTCC AATAAGATGA TCCAAGATGT CTTGAGAAGA AGGTATGATG AACTCACAGA GAGGCAGAAA GATATTTTTC TTGACATTGC ATGTTTCTTC GAATCAGAGA ATGCAAGTTA TGTAAGGTGC CTGGTAAATT CAAGTATTCC GGATGAAATA AGAGATCTCC AAGACAAGTT TCTCGTCAAT ATTTCTTGTG GTCGATTTGA GATGCATGAT ATATTATGCA CATTCGCCAA GGAACTTGCT TCACAAGCAT TGACTGAAGT CACAAGGGTT CATCTCAGGC TGTGGAAATA TCAAGATATC ATTTGGTTGC TCAACAATAA ATTGGAAATG GAAAATGTGA GAGGTATTTT CTTAGACATG TCTGAAGTTC CGGAGGAAAT GATATTTGAT GCTAAAATCT TTCGTATGTG CAATATTCGA TATCTCAAAA TATACAATTC TGTCTACCCT AAGGAAGGCG AAGGTATCTT CAAATTTGAC AGATTTAGGG AGTTCCAGTT ACCATTAAAT AAGGTAAGCT ATCTCCACTG GATAAAATAT CCATTGGATA AACTTCCATC AGACTTCAAC CCGGAGAATC TTGTTAATCT TGAACTGCCT TATAGCTCCA TTAAGCAAGT TTGGGAGGGT GTTAAGGAAA CCCCAAAACT AAAGTGGGCC AATCTCAGCT ATTCAAGTAA GTTGACTAAC CTTTTAGGGT TGTCAAATGC TAAAAATCTT GAAAGATTGA ATCTTGAAGG TTGCACAAGT TTGCTTAAAC TGCCCAAAGA GATGGAGAAC ATGGAAAGTC TTGTGTTTCT CAACATGAGA GGTTGCAAGA GTCTCACATT TCTTCATAGG ATGAATTTGA GCTCTCTAAC AATCCTCATA CTCAGTGACT GCTCAAAACT TGAGGAATTT GAGGTGATTT CGGAAAATCT GGAAGCGTTA TATTTAGATG GAACTGCAAT AAAGGGACTT CCTCCAACCG TCCGGGATCT GAAGAGACTT GCCATATTGA ATATGAAAGG TTGTACAGAA CTGGAGAGTC TTCCTGAATG TCTTGGAAAA CAAAAAGCTC TTGAAGAACT CATACTCTCT AATTGTTCAA AGCTTGAGAG TGTTCCAAAG GCTGTAAAAA ACATGAAAAA ATTACGGATC TTATTGCTTG ATGGCACAAG AATCAAAGAT ATCCCGAAGA TAAACTCGCT AGAGCGTTTG TCCTTAAGTA GAAATATTGC AATGATCCAT CTGCAAGATA GTCTCAGTGG GTTCTCTAAC CTGAAATGTG TTGTCATGAA GAACTGCGAG AATCTCAGAT ATCTTCCATC GCTTCCACGA TCTCTTGAGT ATCTAAACGT ATATGGTTGT GAAAGACTAG AAACAGTTGA GAATCCACTG GTCTTTCGTG GGTTCTTTAA TGTAATTCAG CTTGAGAAGA TCCGTTCCAC TTTCTTGTTC ACTAATTGCA ACAATCTGTT TCAAGATGCA AAGGAGTCAA TCTCATCCTA CGCAAAATGG AAATGCCACA GACTTGCACT TGACTGCTAC CAATTGGGCA TAGTTTCAGG AGCTTTTTTC AACACTTGCT ATCCTGGATT TATAGTCCCT TCGTGGTTCC ACTACCAAGC AGTTGGATCA GTCTTTGAGC CAAGGCTGAA ATCACATTGG TGTAACAATA TGCTTTACGG GATAGCTCTA TGTGCAGTTG TCTCATTCCA TGAGAACCAA GATCCGATCA TCGACAGTTT CTCAGTAAAA TGCACACTGC AGTTTGAAAA CGAAGACGGG TCTCGTATCC GATTTGATTG TGATATCGGA AGTTTGACAA AACCAGGAAG AATTGGGGCA GACCATGTTT TTATCGGCTA TGTCCCTTGC TCACGTTTGA AAGATTACTA CTCTATACCT ATTTATCACC CTACATATGT AAAAGTGGAG TTCTACTTGC CTGATGGCTG TAAAAGTGAA GTGGTGGATT GTGGGTTCCG TTTGATGTAC GCCAAACCAG GTAAGTATTA A 
Length3471
Protein Sequence
Protein Residue
Map Locationscaffold_8: 2650194.. 2683362
Download Sequence
A.thaliana
AGI-codeAT5G44870.1
DescriptionDisease resistance protein (TIR-NBS-LRR class) family
TAIR curator summary
Alias[LAZ5][TTR1][LAZARUS 5][tolerance to Tobacco ringspot virus 1]
Gene coexpression
MR
MR Locus Description
1 Ahg907325
2.44949 Ahg479349 PLAC8 family protein
3 Ahg900951 Plant invertase/pectin methylesterase inhibitor superfamily protein
15.0997 Ahg496457
15.2971 Ahg936340
15.4919 Ahg941785 F-box associated ubiquitination effector family protein
16.9706 Ahg937866 HXXXD-type acyl-transferase family protein
20.7364 Ahg930776
21.095 Ahg325917 GHMP kinase family protein
21.3542 Ahg900312
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression