Detail


ID : Ahg330931

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|330931|fgenesh1_pm.C_scaffold_8000274
Sequence
ATGGATGAAG TAAAAAATCT TGATCGGAAA AGCTTCTTGG ATTTTACAAA ATTGCCACCC TCTCAATGGG GTGATCAGTT CCTCAAATTT TCCATGGCTG ATTCTGATTT TGATGCTCTT GAAAGAGAGA TTAAAGTACT AAAGCCTAAA GTAAGAGAGA ACATATTCAT TTTGTCTTCC AGAGACAAAG ACGCAATGAA AAGAACAATT CTTTCTATTC ATTTTCTGAA CAGTCTTGGT CTTTCATACC ATTTTGAGAA GGAGATCGAA GAAAGCCTGA AACATGCTTT CGACGAGGTA GAAGATTTGA TCGCGGATGA AAATGATTTG TACACAATCT CCACCATCTT TCGAGTTTTC AGAACATACG GTTACGACAT GTCTTCGGAT GTGTTCAACA GATTCAAAGG AGACGACGGT AAATTCAAGG AAAGTTTAAT AGAAGATGTT AGGGGTATGC TAAGCCTCTA CGAAGCAGTG CACTTTGGGA CAACGAAAGA TCATATATTG GATGAAACCT CGTGCTTCAC ATTGAACCAC TTGGAGCCAC TAGCTACATG TCGCAGAGAG TGCCCACCAC ATATTTCAAA GCTTATACAA AATTCCATTC ACATACCTCA GCACCGGAAC ATCCAAGCTC TGGTTGCAAG GGAGTATATC TCGTTCTATG AACACGAAGA AGACCGCGAC GAAATACTTT TTAAGCTAGC CAAGCTCAAT TTCAAGTTCT TGCAGCTTCA TTACTTCCAA GAATTAAAAA CCATCACAAT GTGGTGGAGG GAATTAGACC ATACATCAAA CTTTCCACCT AACTTCAGAG AAAGAACTGT AGAGACTTGG TTTGCAGCAT TGATGATGTA CTTTGAGCCA CAGTTTTCAC TTGGGAGAAT TATGTCGGCT AAGTTATACT TAGTAATTAC ATTTCTAGAC GACGCTTGTG ATATACATGG TTCAATTCCT GATGTTGAGA GCCTGGTCGA TTGTCTGGAA AGATGGGATC CGGATTACAT GGAAAATCTT CATGGTCACA TGAAGACTGC CTTCAAATTT GTGATGTATC TTTTCGAAGA GTATGAAGAA ATATTAAGGT CACAAGGAAG ATCCTTTGTG TTGGAGAAGA TGATAGAGGA GTTCAAGATA ATTGCTAGGA AAAACCTCGA ACTTGTCAAA TGGGCACGGG GAGGTCATGT GCCTAGCTTT GATGAGTATA TAGAGTCTGG TGGAGCCGAG ATTGGTACAT ATGCCACCAT AGCATGTTCC ATCATGGGAC TTGGAGAGAT TGGTAAGAAG AAAGATTTTG AGTGGCTAAT ATCTAGACCA AAGCTCGTTC GGACTTTAGG GGCAAAGACC CGTCTCATGG ATGACATAGC CGACTTTAAG GAGGATATGG AAAAAGGTTA TACTGCAAAT GCTGTCAACT ATTACATGAA CGAACACGGA GTTACAAAAG AAGAAGCCAA TAGAGAACTT GAAAAGATGA ATGGAGATAT GAACAAGATT GTAAACGAAG AGTGCTTGAA GATAAGTACC ATGCCACGCC GAATTCTTAT GCAATCCGTC AATTATGGAC GTTCATTGGA TGTTCTCTAT ACCGCGGATG ATGTCTACAA CCACCGCGAA GGAAAACTCC AGGAATATAT GAGCCTTTTG CTCGTAGATC CCATACTTCT TTAG
Length1674
Protein Sequence
Protein Residue
Map Locationscaffold_8: 2858673.. 2861072
Download Sequence
A.thaliana
AGI-codeAT5G44630.1
DescriptionTerpenoid cyclases/Protein prenyltransferases superfamily protein
TAIR curator summaryEncodes a sesquiterpene synthase involved in generating all of the group B sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in intrafloral nectaries.
Alias
Gene coexpression
MR
MR Locus Description
12.1655 Ahg328880 diacylglycerol kinase 6
13.5647 Ahg916359
15.4919 Ahg474192 Leucine-rich repeat protein kinase family protein
22.0907 Ahg929484 F-box family protein
22.4499 Ahg472923 K-box region and MADS-box transcription factor family protein
31.7333 Ahg924411
35.8329 Ahg943328 RNI-like superfamily protein
36.9865 Ahg902403 Pectin lyase-like superfamily protein
53.2165 Ahg898933 MAP kinase 10
53.8052 Ahg951890
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression