Detail



ID : Ahg331135

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|331135|fgenesh1_pm.C_scaffold_8000478
Sequence
ATGTTCAACA CCAACAACAG TGTCTCAATC TCAGTATCTG ACGACGAATC CAACGATTTG AATCGGATCC GAGCTTGAAC CCGACGAAAG CGGAAGAAAT TGAGTCACAG AACCACCTAC GAGCTTCCTC GTCACGTTCT AAGGCTTTTC GTGAGATACT GGGTCGTATT AGTTTTTCTT CTCGCAGTTA TGTTGCTTGT TTTCGAATCA ACGAGGATTG GGATCAAATC TAGTGTGTTG AAGAATCCAG ATTCGAGTGG AAAAGAGAGT CCTAGTAAGA AAAATGAAGG AAATTTGAAC CGATTGGATC CAACTACGAA GGTTATTGGT GGTGTTAGAC AACGTTGTTT GAAGCTTTTA CCACCTGAGG AGCTTGAGCA TCTTGATATC TTAGAGCGTA AAGATTCAGG CACTCCGGTT AAGAGAGTTG TGTATCTTAC TGATGCGAAT GTGTCGATGG GTGAAATGAA AGCTGTTCGT GGTAATGGGA CGCGGTTTAA TTTATTCACG GGGAATCAGA CTTTTGCTGA GAGAGAGAAT AGTTTTCAGG TAAGGGAAAC AGTTTCTTTG CATTGTGGAT TTTTTAATGA AAATGGGGGA TTTAGGATTT CGGATAAGGA TAAGAGGTTT ATGCAAACAT GTGAAGTTGT AGTCTCGACA TGTGCGTTTG GTGGTGGTGA TAATCTTTAT GAACCTCTTG GAATGTCTAA GGCATCAAGT CAAAAGGTTT GCTATGTTGC GTTTTGGGAT GAAGTTACTC TTGCAACACA AGAAGCAGAG GGTCATAAGA TCGATGAGAA TGATCACATT GGAAAGTGGC GTATTGTGAT TGTAAAGGAT CTGCCTTTTA CAGACCAAAG GCTTAATGGG AAGATCCCAA AGATGTTGGC CCATCGCCTT TTCCCAGATG CAAAGTATTC GATTTGGGTA GACTCAAAGT CCCAGTTTAG AAGAGACCCA CTTGGTGTAC TAGATGCTCT TCTTTGGCGA ACAAATTCAG TGCTTGCAAT TTCAGAACAT GGAGCTCGAA GCAGCGTATA CGATGAGGCA AAAGCTGTCG TGAACAAACA CAAAGCTACA CCTGAAGAAG TTGAAGTCCA AATAAATCAA TACCGACATG ACAAATTACC TGAAGATAAA AGATTCAACG GGAAAAAAGC TTTATCCGAA GCCTCTGTGA TTGTGAGGGA ACACACTCCA TTGACAAATC TATTCATGTG CCTCTGGTTC AATGAAGTTG TCCGCTTCAC TTCGCGTGAT CAATTGAGTT TCCCATACGT TCTTTGGCGA TTGAAAGTTC TCAAGAACAT CAACATGTTC CCTGTGTGTA CACGTAAAGA TCTCGTCAAT AGCATAGGCC ATGTACGCAA GGCTAAACCA TTAAGAATCA TCTTCCTCAT CGCTGTCGCC ACTGCTTTCC TCGTTGTTCT TCTACTCGCT TTATTCTCAC CCGTTCCTGA TTACGACCCG CCGGGATCAT TCTTCTCCTT CTCCCTCTAT GTTCAACAAA CCCACACCCC ATCCTCCTCC TATTCTTCTC GTCGGTCCAG TCAACACATA GCCCGGCCCC ATGGCCAAGG AGGAGGAAAA GGAGCATTGA TTTTCCGGCG TACGCTTACT GAAGGACCCG AGAATAATTC ACGGATCGTG GGCAAAGCTG AGGGATTTAT AATCCCACAT GAAGACTTTG CTAGCTCGGA TTTTAACGTG ATATACTTGA CGTTGGAGAC TCCTGAGTAC ACGGGGAGTG TTAGCATTAG GAGTAGAGAC ATGGCACATA AATTGAAAGA GGTTATGGAG GTAGTGGGAG GGACAGGAGC TTTCGCCTTT GCTCGCGGAA TCGCCATGTT TGCTGAGATT GATGATCATG AGGAAGAAGC TGTAACCACT TACCGTGTTA AGCTTCTACT TAGATTTCCA CATACTTCTC ACGTAGATCC ACCATGA 
Length1947
Protein Sequence
Protein Residue
Map Locationscaffold_8: 5600463.. 5603624
Download Sequence
A.thaliana
AGI-codeAT5G42660.1
DescriptionProtein of unknown function (DUF616)
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.74166 Ahg492932 GDA1/CD39 nucleoside phosphatase family protein
10.2956 Ahg932850 Protein of unknown function (DUF616)
16.8523 Ahg488464 Peptidyl-tRNA hydrolase family protein
21.6333 Ahg477790
33.8969 Ahg919313 Basic-leucine zipper (bZIP) transcription factor family protein
33.9411 Ahg475399 Putative serine esterase family protein
34.641 Ahg487627
42.45 Ahg480678 Arabidopsis RAC-like 1
44.0908 Ahg943624 Nucleotide-diphospho-sugar transferase family protein
60.6218 Ahg492979 RAB GTPase homolog A1D
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression