Detail



ID : Ahg331461

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|331461|fgenesh1_pm.C_scaffold_8000804
Sequence
ATGGCTTTAA TCAACAAGAT CCTCAACATC CTTCTTCCTA TTGTCACGGT TTCGTTTCTT TTAGTGTTCA TGCCATTTTC AATATTCTTC AAGCTCCTCG GGTTCATAAG GAGATGCAAA GAGTCTGAGA AAGTCGACGG AAAAGTGGTC ATCATCACCG GATCTTCCTC TGGAATTGGT GAGCACCTCG CGTATGAGTA TGCTCGTAGA GGAGCATACT TGACTCTAGT AGCTCGGAGA GAGGATCGTC TCCAGGTGGT TGCTGACAGG TGCAGGAAGC TTGGTTCACC AGACGTTACA GTCTCAGTCA TAGAAGACTG TAAACGTTTT GTTCAAGAAA CCATCTCTCG GTTTGGAAGA TTGGATCGCC TGGTGAACAA TGCTGGAATT GCAGAGGCCA AATTTTTCGA TGACTATTCA GAAATTTCGG ATGTTCTTCC CATTGTGAAT ACTAACTTTT GGGGACCGGT TTACGCAACA CATTTCGCTA TACCACATAT CAAGAAAACA AAAGGAAAGA TCATAGCGGT TGCATCGCCC GCGGGATGGT CTGGAGTGCC AAGGATGAGC ATATATGCTG CAAGCAAAGC AGCTATGATA AACTTCTACG AGACTCTTAG GATCGAGCTT CATCCAGAAG TTGGTGTGAC AATCGTGTTT CCGGGTCTAA TCGAAAACGG AAATACCAAT TCGGACCTTT TGGCTGAGAA ACAAGAGTGG TCACAAGTTG TGGCCATCGA GTCAGCAGCG GTATGCGCCA AAGCGGTTGT TAACGGAATA TGTAGGGGAA AAACCTTTGT GGCAGAGCCG TCTTGGGTTC GTGTCCTGTT CTGGCTTAGT GCTATCTGCC CTGAGCTTCT GATCTCTAAG CCTAAAAGGA ATTAA 
Length885
Protein Sequence
Protein Residue
Map Locationscaffold_8: 13258755.. 13260181
Download Sequence
A.thaliana
AGI-codeAT5G50690.1
Descriptionhydroxysteroid dehydrogenase 7
TAIR curator summaryEncodes a putative hydroxysteroid dehydrogenase (HSD). Genes that encode HSD include: At5g50600 and At5g50700 (HSD1), At3g47350(HSD2), At3g47360(HSD3), At5g50590 and At5g50690(HSD4), At5g50770(HSD6) (Plant Cell Physiology 50:1463). Two copies of HSD1 and HSD4 exist due to a gene duplication event. In Plant Physiology 145:87, At5g50690 is HSD7, At4g10020 is HSD5.
Alias[AtHSD7][HSD7][hydroxysteroid dehydrogenase 7]
Gene coexpression
MR
MR Locus Description
5.91608 Ahg359620
8.83176 Ahg907546 UBX domain-containing protein
12.49 Ahg313838 Cysteine-rich protein
16.1245 Ahg486103
16.1245 Ahg940942
18.7617 Virus0721
18.7617 Ahg932849
24.3721 Virus1072
24.4949 Ahg939308 F-box family protein
25.5734 Ahg942962
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression