Detail



ID : Ahg331604

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|331604|fgenesh1_pm.C_scaffold_8000947
Sequence
ATGTCTAATC TTCATGAGCT CTCGATAGAA AATTCCACTG ATGATCACGC TGGATGTTTT CAAGAAAAAG AGCAGTTATA CGAATGTCCT AAATGCGGTA TCTTCTTCCA CAAGGAATGC ACCGAGTCCA CAACAGAGAT TAACGCTCAC GAAAACCTAG GAGAGGTAAG AGCGGTTGAA GACAAACCCA ACGATGAATC TATCAAAGTT GATGAAAGAG GAGCAAGCAA CATTCATTTC ACAGATGAAC ATCATGGAAA GGTTGATGAT ATAAACAACA CAGGATATGA TGCTTGCAAG TTCAAACAGA TTCTGGAAAA TTACAGCAAG CCAATAGAAC CTAAACACCT TTTCGAGTGT CTCCCAAGCA ATCTTCGGCC ATCATCAGAC GGTGCAAGTA GTGACGGAAA GAGTTATGAT CCACAATCAA ATGGCTTAGA GAAAGATGAT TTTACGGTCC CAACAATCAT CCCACCAATG GTTTTGCCTC TGCTTCATGA TTTAGCCCAA CAAATGGTTA AAGCTGGTCA TCAGCAACAA CTTTTCGAAA CTTACAGGGA TACTCGTAGG GCAGTGTTGG AGCAGAGCCT TGAGAAATTA GGTGTAGAGA GACATAGCAA AGATGCTGTT CAGAGAATGA AGGAGGACAT CTTAGATGCC AAGATGCGGA ATTGGATCCA TTACATGCGA ATATCTGTGA AACTGTTATT TGCTGCGGAA AAGGAAATCT GCAACCAAAT ACTTGATGGT GTTGAGCCAC TTAGAGATCA GTCTTTTGCT GAAATCACTA CTATTAGTTT TGATATGCTT CTTAGTTTCG GATATGCAAT CGCTATCAGC AGGAGATCGC CGGAAAAACT GTTTGTTATC TTAGATATGT ATGAGATAAT GATAGAGCTT CAACCAGAGT TTGAGTTGAT CTTTGGAAGC CAACCTTGTT CCGAGATGAA AGAAGATGCA TTGAATCTGA CAAAGCTATT AGCTCAGACA GTGAAAGAAA CTATTGTTGA TTTCGAAGAC GCTGTTGAAA TGGATGCGAC TGAAACCGTT GTTATGGATG GATCCGTACA TGCGCTAACT AGCTACGTTG AGAGATACGT CACGTACTTG TTCGATTACA AATCGACGTT GAGGCAACTT CTTCCTGATA CCAAGCTGAA ATCCGCGTTA ACGGGTATCA TGAGGGCTTT AATGAACAAT CTGGATGGTA AATCCAGACA GTACGAAGAT GCAGCATTAT CTCAACTATT CTTAATGAAT AATGTGTATT ACATAGTGAG ACATTTTAGA AGGGAAGAAG CAAAGGATTT GTTGGGTGAT GATTGGGTTC AAACACATGG AAGAATCATA AAACAACACG CAAATCAGTA CCAGACAGTT TCTTGGAATA AGATTTTACA GTGTATCACG GTTCAGTCGA GTAAGAGCGG TCTGATAAAG AACAAAAGTA TAACAAAAAC ATTAGTAAAA GAAAAATTCA AGACTTTTAA TTCTCAATTC GAAGAGCTTC ACCAGAGACA ATGCCAATGG TTAGTTCCGG ACGTTGAGAT GCGTGAATCT CTCAGGCTTG CTATTGCAGA GGTTCTTTTA CCTGCCTACG GATCGTTTCT CAAACATTTC GGGCCGATGA TAGAGAGTGG TAAGAACTCA CAGACGTATA TAAGGTTCAC TACTGAGGAC CTTGAGCGAA TGCTTAACGA TTTCTTCGAA GGAAAAAACT TGGAGTGA 
Length1728
Protein Sequence
Protein Residue
Map Locationscaffold_8: 14184263.. 14187327
Download Sequence
A.thaliana
AGI-codeAT5G52350.1
Descriptionexocyst subunit exo70 family protein A3
TAIR curator summaryA member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.
Alias[ATEXO70A3][EXO70A3][exocyst subunit exo70 family protein A3]
Gene coexpression
MR
MR Locus Description
11.4891 Ahg311681 pfkB-like carbohydrate kinase family protein
13.784 Ahg922613
22.7816 Ahg938498
27.7128 Ahg334440 Pentatricopeptide repeat (PPR) superfamily protein
36.0832 Ahg944937
41.1339 Ahg493850 Receptor-like protein kinase-related family protein
42.6615 Ahg472567 Polyketide cyclase/dehydrase and lipid transport superfamily protein
48.518 Ahg316517 Glycosyl hydrolase superfamily protein
53.963 Ahg331130 AP2/B3-like transcriptional factor family protein
60.4318 Ahg931328 Galactose oxidase/kelch repeat superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression