Detail



ID : Ahg332000

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|332000|fgenesh1_pm.C_scaffold_8001343
Sequence
ATGGTGGTGA TGACGAACAA GTTCTTCGAA TCAATCGGTG GAGCTCCGTC GTATACTTCA GTTTCCGTCG CCGTTAAAGG ATCCGTCGGT GACGCCGTAG GAGGAACTGC TAGTCGTCGT GCTCTTCGTT GGACCATTGA AAATTTCCTT CCTAAAATCG ATCGATTAGT TCTTGTTCAT GTCATGCCTA CCGTCACAAG TATTCCATCT CCTTCTGGAT CGAAGATTCC AGTAGAGGAA TTGGAAGAGA GTGTTGTGTC GATGTATAAA AGAGATTTGA GAAAAGAATA TGAACAGGTT TTTGTTCCGT TTAAGAGGAT CTGCAAATCA AACAAAGTTG AGACTTTGTT GTTGGAACAT CATGATCCTG CAAAGGCACT TTTGAAGTAT ATGTTAGATT CTGAGGTTGA GTGTTTAGTG ATTGGCTCTT GCTCTTCAAA TTTCCTCACA AGGAAAAAGG GACAAGAAAT GCCATTAACG GTACTAGGAG AAGCTCCAGA GACATGTGAG ATCTTTGTTG TTTGCAAAGA TAGAATCTTA ACCAAATCGA CCAATCAGTT TACCGCAGAT TCATCTTCTA GTTTCCGTAT ACCCGAAGGA GCTGAAGCTT ATACTGAATC TTTCAGTCGC TCACGCTCTG AGAAGACGGG GTTGTCTGCT TCATCCATAT CATCTTCAGG CAGGATGCAA AATGGAAGGC CTGCCTCTTT ACCGCATAGT CATCCAACCT CTCGAGTGTT TTCTGATGCA CAGTCTTCAA CTGATTTCGG TTTGGCCGAT GACGAACACA CCCGTTCTAT CCTTAGACAT AGTACTGTTT CCAGTAGTCA AAGACATTTG GATCCTAGAC CTCACATAAA AACACCAAAG TCAGGTGTAA AAGCTGAGGT AGAGAAGCTA AGGAAAGAAG TACAAACCAC TCTTTCCATG TACAAACAGG CTTGTGAAGA GCTAGTTCAT AAACAAACGC AGGTCCAGTC TCTTTCCTCT GAGTGTATTA AAGAAACGGA AAGGGTCATC ACTGCTCTGG AAAAAGAAGA AATGCGGAGG AAAGCAGCAG CAGAAGAGAA AGAAAAGCAT CTAAAAGCTG TAAAAGAAGT CGAGGAAGCA AAATCAATGC TAGCCAAAGA ATTCTGCGAG AGGCAATTAG CTGAGCTAGA TGCCCTCAAG CAGTCCATTG AGAAACAGAA AGTCATTGAG CAACTCTTCT TGAGAGACGG GAGGTACAGA AAGTACACCA AAGAAGAAAT AGCTGTAGCT ACAGATAATT TTTCTTCCCG TAAAATAATC GGCGAAGGAG GATACGGAAA AGTATACAAA TGCAGTCTCG ATCATACCCC AGTAGCTCTT AAAGTTCTCA AACCTGATTC AGTCGAAAAG AAAGAGGAAT TCTTAAAAGA GATCTCTGTC TTAAGCCAGC TTCGTCATCC CCACGTGGTT CTTCTACTCG GTGCTTGTCC TGAAAATGGC TGCCTTGTTT ACGAGTACAT GGAAAATGGT AGCTTAGATT GTCACATCTC CCCCAAAAAA GGGAAACCAT CTCTCTCATG GTTTATCAGA TTCCGAATCA TCTATGAAAC CGCTTGTGGT TTAGCTTTCC TCCACAACTC TAAACCTGAG CCCATCGTCC ACCGTGACCT CAAACCAGGC AACATTCTCT TAGACAGAAA CTTTGTTAGC AAAATCGGCG ACGTTGGACT CGCAAAACTC ATGTCAGAAG AAGCACCAGA CAGTCTCACA GTTTACAGAA ACTCGATTAT CGCCGGTACA CTCTACTACA TGGACCCGGA ATATCAAAGA ACCGGCACAA TCAGACCGAA ATCAGATCTT TACGCATTTG GAATCATAAT TCTCCAGCTT TTAACCGCTC GACATCCCAA CGGTCTTCTT TTCTGCGTTG AAGACGCAGT AAAGAGAGGT TGTTTTGAAG ATATGTTAGA TGGATCAGTC AAAGATTGGC CCATAGCCGA AGCGAAAGAA CTAGCTCGCA TTGCAATCAA GTGTTCGCAG CTCAAATGCA GAGACAGACC AGATCTCAGC ACACAAGTCT TGCCTGCTCT CAAACGGATT CTTGAATCTG CAAATAGTAG ACTCAAGACA GAACAAGCTA ATGTTCGACC ACCAACTCAT TATTACTGTC CAATTCTTAA GGAAATAATG GAAGATCCAC AGATAGCAGC AGATGGATTC ACTTACGAAG GAAAAGCAAT AAAGGCATGG TTCCAAAAAC ATCAAAATGT GTCTCCCGTG ACTAAGCATC GGCTAAAAAA TTCTGATCTT ACACCGAACC ACACTCTCAG ATCGGCTATA CAAGAGTGGC GATCTCGTTC ACGCTTAGAC CTCTCCACTA CTCTTGGCTC CTATTGA 
Length2367
Protein Sequence
Protein Residue
Map Locationscaffold_8: 16801730.. 16804835
Download Sequence
A.thaliana
AGI-codeAT5G57035.1
DescriptionU-box domain-containing protein kinase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1 Ahg470210 S-adenosylmethionine synthetase 1
1.41421 Ahg493199 acyl-CoA oxidase 1
3 Ahg479603 Ethylene insensitive 3 family protein
3.60555 Ahg491213 GTP binding protein beta 1
6.63325 Ahg478029 Sec23/Sec24 protein transport family protein
7.34847 Ahg919597 fatty acyl-ACP thioesterases B
8.12404 Ahg488305 shaggy-like kinase 13
8.3666 Ahg484508 global transcription factor group E8
8.77496 Ahg491086 Protein kinase superfamily protein
9.79796 Ahg484193 ammonium transporter 1;1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression