Detail



ID : Ahg332324

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|332324|fgenesh1_pm.C_scaffold_8001667
Sequence
ATGGGAAGGA GAAATTCATA TTTTCGAGGG AATTTTGTTC CGTTGTTTTT CGTTTTTATC GTGTTGATTT TTCAGCAAGA AATAGTGATT TGTCAAGAAG ATAGAAGCTT GGATAATCCC GCGGCTAATC GTCTCTATAA CCAATTCGTC TTCGACAAAA TATCGAATCT CACCGAAGTT TTTGAGGATG ACATCAAAAG AGAGCTCGGA TTTTGCATTA CCAATGTAAA AGAAGATTAT AACGAAGCCT TTAATTTTTC TACAAAGCCA GATTTCTTAA ACGCATGTGG TAAAACCACA AAAGGTGACA TGATGCAGAG GATATGTACG GCTGCAGAAG TGAGGATATA CTTCAATGGA TTATTAGGAG GTGCAAAGAG AGCTACGAAT TACTTGAAAC CGAACAAGAA CTGCAATCTA TCTTCATGGA TGTCTGGATG TGAGCCTGGA TGGGCTTGTC GTACTGCTAA AGATGTGAAA GTTGACCTTA AAGACGATAA GAATGTTCCC GTAAGAACTC AGCAATGCGC GCCTTGTTGC GCAGGTTTCT TCTGCCCTCG TGGTATCACA TGCATGATCC CTTGTCCTTT GGGAGCTTAT TGTCCAGAAG CTACGCTGAA CAGAACAACA GGATTATGCG ACCCATATCA TTACCAGCTT CCTTCTGGAC AGCCAAATCA TACTTGTGGT GGAGCTGATA TTTGGGCTGA TATTGGTAGT AGCAGTGAAG TCTTCTGTTC AGCTGGATCC TTTTGTCCTT CCACTATCGA CAAGCTTCCT TGTACTAAAG GACATTACTG CAGGACAGGT TCTACTGCAG AACTAGATTG TTTTAAGCTG GCAACGTGCA ATCCAAGATC AACAAATCAA AATATCACAG CATATGGAAT CATGCTTTTT GCCGGCCTAG GTTTCTTGCT CATAATCTTA TATAACTGTT CTGATCAAGT GCTTGCGACG AGAGAAAGAA GGCAGGCAAA ATCCAGAGAA AAAGCAGTGC AGAGTGTGCG TGATTCGCAA TCGCGAGAGA AATGGAAATC TGCCAAAGAT ATTGCAAAGA AGCATGCAAC CGAGCTGCAA CAATCGTTTT CCCGAACATT TTCTAGGAGG AAATCTATGA AACAGCCTGA TTTGATGAGA GGTTTAAGCC AAGCAAAACC TGGATCAGAT GCTGCCTTAC CACCAATGCC AGGAAGCAGC TCAGACATGA AAAAGGGAAA GAAAAAGGAA AAGAACAAAC TAACAGAGAT GTTACATGAC ATTGAACAAA ACCCTGAAGA TCCTGAAGGG TTTAATCTGG AGATTGGTGA TAAAAACATT AAAAAGCATG CTCCAAAAGG CAAGGCCTTG CATACACAGA GCCAGATGTT CAGGTATGCT TATGGCCAGA TTGAAAAGGA AAAAGCAATG CAGGAGCAGA ACAAGAACTT GACTTTCTCT GGAGTTATCT CTATGGCTAA TGATATTGAT ATAAGAAAGA GACCTACGAT TGAAGTTGCT TTTAAAGATC TTTCAATTAC TTTAAAAGGA AAAAACAAAC ATCTAATGAG ATGTGTGACC GGAAAACTAT CACCTGGACG TGTTTCTGCT GTGATGGGTC CTTCTGGAGC CGGGAAAACA ACTTTCCTAA CAGCTTTGAC AGGCAAAGCA CCAGGTTGCA CCATGAGTGG AATGATTCTC GTAAACGGAA AAGTTGAATC AATTCAATCC TACAAGAAAA TCATAGGTTT TGTACCTCAG GATGACATAG TCCATGGAAA CTTGACAGTG GAGGAGAATC TCTGGTTCAG TGCAAGATGC AGGTTGCCTG CAGATCTCCC AAAGCCGGAA AAGGTTTTAG TTGTAGAAAG AGTCATTGAG TCACTTGGTC TGCAACATGT TCGAGACTCT CTTGTTGGGA CTGTGGAAAA AAGAGGAATC TCTGGAGGTC AGAGGAAAAG AGTCAATGTG GGTCTTGAAA TGGTTATGGA ACCATCACTT CTGATATTAG ATGAACCAAC TTCAGGTCTT GACAGTTCAT CTTCTCAGTT ACTTCTCAGA GCTTTACGTC GTGAAGCTCT TGAAGGAGTA AACATATGTA TGGTTGTCCA CCAACCCAGC TATACTCTTT TTCGGATGTT TGATGATCTA ATACTTCTAG CAAAAGGGGG ACTAATATGT TATCAAGGAC CAGTCAAGAA AGTTGAAGAA TACTTCTCGA GTCTTGGGAT CGTTGTTCCT GAACGTGTGA ATCCGCCTGA TTACTACATT GACATATTGG AAGGTATACT AAAGCCAAGC ACAAGCTCAG GAGTTACTTA TAAGCAGCTT CCAGTTAGAT GGATGCTTCA TAATGGGTAT CCAGTTCCTA TGGACATGCT TAAAAGCATT GAAGGGATGG CTTCTTCTGC TTCCGCTGAG AACTCTGCTC ACGGAGGAAG CGCTCATGGG AGCGTTGTAG GAGAAGACGG AACATCTTTC GCTGGAGAGT TCTGGCAAGA TGTCAAAGCA AATGTTGAAA TCAAGAAAGA TAACTTGCAG AATAACTTCA GTAGTTCAGG TGACTTATCC GAAAGAGAAG TTCCCGGTGT GTATCAGCAA TACAGATACT TCTTAGGAAG GTTAGGTAAA CAAAGACTGC GAGAAGCAAG GACACTAGCT GTAGACTACC TAATACTTTT ACTTGCTGGT ATCTGCTTAG GAACGCTTGC TAAAGTGAGC GATGAAACAT TTGGTGCCAT GGGATATACA TATACAGTCA TTGCTGTTTC TCTCTTGTGT AAGATTACTG CATTAAGATC TTTCTCTCTG GATAAACTAC ACTATTGGAG AGAAAGCCGA GCCGGAATGA GTAGCCTGGC TTACTTCCTA GCGAAAGACA CAGTTGATCA CTTCAACACC ATTGTTAAGC CGCTTGTTTA TCTATCCATG TTCTACTTCT TCAACAATCC AAGATCAACA GTTACAGACA ATTATGTTGT CCTAATCTGT CTTGTATACT GTGTGACTGG CATAGCTTAT GCCCTGGCCA TACTTTTCGA ACCTGGTCCA GCTCAACTAT GGTCAGTGTT ACTTCCAGTG GTGCTGACTC TAATTGCCAC CAGTACAAAC GACAACAAAA TCGTAGATTC AATCTCAGAG TTGTGCTACA CGAGATGGGC TCTAGAAGCA TTTGTGGTAT CAAACGCTCA AAGATATAAA GGAGTGTGGC TTATCACTCG ATGTGGATCG CTGATGGAGA ATGGATACAA CATCAAGCAC TTCCCTCGTT GCCTCATCTT CCTGACATTA ACCGGTATCT TGAGCCGCTG TGCAGCTTTC TTTTGTATGG TAACCTTCCA AAAGAAGTAG 
Length3330
Protein Sequence
Protein Residue
Map Locationscaffold_8: 18466413.. 18470906
Download Sequence
A.thaliana
AGI-codeAT5G60740.1
DescriptionABC transporter family protein
TAIR curator summary
Alias[ABCG28][ATP-binding cassette G28]
Gene coexpression
MR
MR Locus Description
10 Ahg319311 Ubiquitin-specific protease family C19-related protein
10.3923 Ahg485623
12 Ahg932342
29.4449 Ahg492665 root hair specific 14
30.9839 Ahg933900
35.9166 Ahg320434 Plant invertase/pectin methylesterase inhibitor superfamily
39.6863 Ahg486437 NAD(P)-binding Rossmann-fold superfamily protein
43.9204 Ahg951925
46.2169 Ahg907586
48.0833 Ahg952189
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression