Detail



ID : Ahg332347

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|332347|fgenesh1_pm.C_scaffold_8001690
Sequence
ATGGCACAGC AGGAAGCTAG TCCTTCCCCT GGTGCTGAGG TTGTTGGTCG TGCCTTTGTG GAGCAATACT ATCATATTCT TCACCAATCT CCCGGTTTAG TTCACCGGTT TTATCAAGAT TCGAGCTTGT TAACCCGACC TGATGTTACC GGTGCTGTGA CTACTGTCAC AACTATGCAA GCGATCAACG ATAAGATTCT GTCGTTGAAA TATGAAGACT ACACAGCTGA GATAGAAACT GCGGATGCTC AGGAGTCTCA TGAGAGAGGT GCTATTGTGC TGGTTACAGG ACATTTAACC GGGAACGATA ATGTGAGGAA GAAGTTCAGT CAAACTTTTT TCTTGGCTCC ACAAGACAAG GGATACTTTG TCTTGAACGA CGTGTTTCGA TTCCTCGAGG AGAAAGAGGT GACGGCACAA GCCCGCTCTG TCCCCATCAA TGGAAACCCC AGGGATGTTC AGGCTCCCCT GGAACCAGAA CGTGTTATTG TTACTAACGA GCTCGAGGTA GAACCCGAGC CAGTTGCTTC TATCGAGGAA GAAGATCTTG ACAATGTGGC GGAAGTGTAT GATCCTTCTG ATAAAGATGA AGGAGTTGTT GTTGACGTTG AGCCTATCGA ACCTGCTACT CAAATAAGTC ATAATGAAAT CTTATCAGTG TCTCAAGGAG ATGCTCCTAA GCATTCTTAT GCTTCAATCC TCAAGCAGAT GAAAAGCAGT CCAGCACCAA CACACATTGC TCGGAACAAG CCAAGACCAG CTCCAGTCAA CCATAAGCCA ACCGCTCCTC CTGCTAAGCC TGCAGCAGGA CCTGAGGCGT CAGCTCATGA GAATGTTCCA AATAGTAGCC ATGTTGATGT GGAAGATGAT GGTCATTCGA TTTATGTTCG AAATTTGCCG TTTGACTCCA CACCAACACA ACTTGAAGAG GTGTTCAAGA ACTTTGGTGC AATCAAGCAT GAGGGGATTC AAGTCAGAAG CAATAAGCAG CAAGGTTTCT GTTTTGGTTT TGTGGAATTT GAAACATCTA GCGGAAAGCA GAGTGCGCTT GAGGCCTCAC CAGTTACAAT TGGAGATCGT CAAGCTGTTG TAGAGGAGAA GAAAACAAAT AGTCGAGGAG GCGGCAACAA TGGAGGTAGT AGGGGAAGGT ACTTTTCCGG AAGAGGAAGT TTCCGAAATG AAAGTTTCAA AGGAGGACGC GGTAGTGGAG GAAGAGGAGG CTATGGAAGA GGAGGAGGTG AGTTTTCTGG TAGACCAAAG AGCTCAAACC CACGAAATGG AGGAGAAGGT TACCAAAGAG TTCCTCAAAA CGGAGGAGGT GGAAGAGGAG GCCGAGGAGA AGGAGGTCGT GGTGGGTCTC GCGGTGGTGG TTCATCTTGA 
Length1380
Protein Sequence
Protein Residue
Map Locationscaffold_8: 18619074.. 18621088
Download Sequence
A.thaliana
AGI-codeAT5G60980.2
DescriptionNuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
8.30662 Ahg478217 Protein of unknown function (DUF740)
18.868 Ahg488375 RNA-binding KH domain-containing protein
20.8327 Ahg481405 cellulose synthase 10
21.3073 Ahg928450 Kinase-related protein of unknown function (DUF1296)
24.0624 Ahg924045 calpain-type cysteine protease family
28.3725 Ahg494650 actin-related protein 9
31.1127 Ahg487213 Shugoshin C terminus
42.7083 Ahg493738 ARM repeat superfamily protein
43.1625 Ahg323420 ataxia-telangiectasia mutated
47.697 Ahg490568 ARM repeat superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression