| Annotation |
|---|
| Description | jgi|Araly1|332664|fgenesh1_pm.C_scaffold_8002007 |
| Sequence |
ATGGAGTTGG GATCCAGACG AATCTACACG ACGATGCCGT CGAAGCTCCG ATCTTCTTCA CTTCTTCCAC GTCTTCTGCT CCTTTCTCTC TTATTACTCC TCTTCTATTC CTTAATTCTT CTCCGCCGCC CGATCACATC AAACCTCGTC TCTCCTCCGC CGTGCGATCT CTTCTCCGGC AAATGGGTCT TCAATCCAGA AACTCCGAAA CCGTTGTACG ACGAGACTTG TCCTTTCCAC AGAAACGCTT GGAATTGTTT ACGGAACAAG CGAGATAACA TGGATGTTAT CAATTCATGG AGATGGGTTC CCAGTGGCTG TGGATTGAGT CGCATTGACC CGGCTCGGTT TCTAGGGATG ATGAGGAACA AGAATGTTGG GTTTGTTGGG GATTCTCTGA ATGAGAATTT CTTGGTTTCG TTCTTGTGTA TACTTAGAGT GGCTGATCCA AGTGCTGTGA AGTGGAAAAA GAAAAAAGCT TGGCGTGGAG CTTACTTCCC TAAGTTCAAT GTCACTGTTG CTTATCATAG AGCTGTGCTT CTCGCTAAAT ATCAGTGGCA GCCGAAGTCT TCTGCTGAAG CTAATCAAGA CGGAGAGAAA GGAACGTATC GAGTTGATGT TGATGTTCCT GCAAATGAGT GGATCAATGT CACTAGCTTC TACGATGTTC TCGTTTTTAA CTCTGGCCAT TGGTGGGGTT ACGATAAGTT TCCTAAAGAG TCACCTCTTG TCTTCTATCG AAAGGGAAAG CCGATAAACC CTCCCCTTGA TATATTACAA GGATTTGAAG TAGTTCTTCA ACATATGGTT TCTTATATCC AAAGAGAAGT CCCAGCGAAG ACCCTTAAGT TCTGGCGTTT GCAATCACCT AGGCATTTCT ATGGCGGTGA TTGGAACCAG AACGGAAGTT GTTTGCTCGA TAAGCCACTC GAAGAAAACC AGCTTGACTT GTGGTTTGAT CCCAGGAACA ATGGAGTGAA CAAAGAAGCA AGAAAGATTA ACCAAATCAT CAAGAATGAG TTGCAAACGA CAAAGATCAA ATTACTTGAT CTGACCCATC TAAGCGAATT CAGAGCAGAC GCCCACCCAG CTATCTGGTT AGGGAAGCAG GACGCGGTGG CAATATGGGG ACAAGACTGT ATGCATTGGT GCCTACCCGG TGTTCCCGAC ACATGGGTCG ATATCTTAGC GGAACTCATT CTCACTAACT TGAAAACAGA GTGA |
| Length | 1224 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 20189730.. 20191492 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G64470.2 |
| Description | Plant protein of unknown function (DUF828) |
| TAIR curator summary | Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). |
| Alias | [TBL12][TRICHOME BIREFRINGENCE-LIKE 12] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 42.5088 |
Ahg474701 | TBP-ASSOCIATED FACTOR 6B |
| 55.9911 |
Ahg481737 | Plant protein of unknown function (DUF868) |
| 56.9912 |
Ahg929879 | |
| 58.3952 |
Ahg471841 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| 58.532 |
Ahg921503 | ARM repeat superfamily protein |
| 60.075 |
Ahg489516 | Uncharacterized protein |
| 63.2456 |
Ahg473232 | |
| 73.171 |
Ahg478735 | Lysyl-tRNA synthetase, class II |
| 74.0675 |
Ahg318898 | cobalt ion transmembrane transporters |
| 87.3728 |
Ahg495292 | methyl-CPG-binding domain protein 13 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
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| The four seasons |
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| Growth Chamber expression |
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