Detail



ID : Ahg332814

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|332814|fgenesh1_pm.C_scaffold_8002157
Sequence
ATGGGTGCCC CAAAGCAGAA GTGGACACCG GAAGAAGAAG CAGCTCTTAA AGCTGGAGTT CTTAAGCATG GCACTGGGAA GTGGCGTACC ATACTCTCCG ATACTGAGTT TAGTTTAATC CTTAAGTCTC GCTCAAATGT TGATCTTAAG GACAAGTGGA GAAACATAAG CGTGACAGCT TTATGGGGTT CAAGGAAGAA GGCTAAACTT GCGCTTAAAA TGACTCCGCC GGCTACTAAA CAGGATGATA ACAACACAGC TCTTAGCATT GTGGCTTTGG CTAATGACGA TGAACGGGCA AAACCAACTT CCCCTGGAGG TTCTTGTGCT TCAAAGAGAT CAATTACAAG TTTGGATAAG ATCATCTTGG AGGCAATTAC TAACTTGAAG GAACTACGCG GTTCTGACAG AACATCGATC TTTCTGTATA TAGAGGAGAA TTTCAAGACT CCACCGAATA TGAAAAGACA TGTCGCAGTA CGATTAAAGC ATTTATCATC GAATGGAACA TTAGTTAAGA TAAAGCACAA GTACAGGTTT TCTTCTAATT TTATCCCCGT AGGAGCAAGA CAGATGTCTC CTCAACTCTT TTTGGAAGGA AACAACAAGA AAGACCCACC AAAACCCGAG GAGAACGGCG CCAAAAGCCT CACTAAGTCC CGAGTAGACG GTGAGTTATT TATGATAAAA GGCATGACAG CTCAAGAAGC TGCAGAGGCT GCAGCAAGAG CAGTTGCAGA GGCAGAATTT GCTATCACAG AGGCTGAAGA AGCAGCAAAA GAGGCAGCAA GAGCAGAAGC AGAAGCTGAA GCTGCTCAGA TATTTGCAAA GGCAGCCATG AAAGCTTTGA AGTTCAAGAT CCGTAATCAT CCTTGGTGA 
Length879
Protein Sequence
Protein Residue
Map Locationscaffold_8: 20884841.. 20886084
Download Sequence
A.thaliana
AGI-codeAT5G67580.1
DescriptionHomeodomain-like/winged-helix DNA-binding family protein
TAIR curator summaryEncodes a telomeric DNA binding protein. In vitro, the protein preferentially binds double-stranded telomeric repeats, but it can also bind to the single G-rich telomeric strand.
Alias[ATTBP3][ATTRB2][TBP3][TRB2][TELOMERE REPEAT BINDING FACTOR 2][TELOMERE-BINDING PROTEIN 3]
Gene coexpression
MR
MR Locus Description
16.8523 Ahg490436
18.1108 Ahg482865 transcript elongation factor IIS
34.0588 Ahg496166 Concanavalin A-like lectin protein kinase family protein
34.8138 Ahg890633 enoyl-CoA hydratase/isomerase A
40.398 Ahg475156 DNA-binding storekeeper protein-related transcriptional regulator
41.1339 Ahg496509 Zinc finger C-x8-C-x5-C-x3-H type family protein
44.4297 Ahg475845 glucosidase 1
45.2769 Ahg929419 ATP binding microtubule motor family protein
45.607 Ahg477790
57.8273 Ahg353533
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression